Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1426 |
Symbol | |
ID | 4810576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 1747073 |
End bp | 1747807 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640106849 |
Product | AzlC-like protein |
Protein accession | YP_001037850 |
Protein GI | 125973940 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000261082 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA GTCAAACAAA AATAAATGAT TTTGTCTATG GATTTAAAAA AGGAACACCG ATTCTATTAG GATACATACC GGTAGCTTTT ACTTTCGGCC TTATGGCTGT CGGCGGCGGA CTTCATCCGT TAATGGCAGT GTTTATTTCC CTGACCAACC TTACCAGCGC AGGGCAGTTT GCCGGTACAA ATTTAATTAT CCAGGGTGCG GGTTATCTTG AAATTGCCCT TACCACCTTC GTTATAAATA TCAGGTACAT GCTGATGTCT CTTTCTCTGT CTCAAAAAAT CGATCCAAAG ATTACACTTT GGCAGCGTCT TGTCTTCGGA TTTGGAATAA CCGACGAAAC CTTTTCGGTG GCTTCAATGG AAAAAGGAAG GTTGTCTTAT TTCTATATGT TGGGGCTAAT CGCAGGACCA ATTTTCGGCT GGAGTTTCGG AACGGCTTTA GGTGCCTTCA CCAGTTCCGC ATTGCCCGAA TCCCTGAGCA ATGCAATGGG TATTGCCTTG TTCGCCATGT TTATTGCAAT AATAGTTCCG CCTGCAAAAA AATCCAGACC GGTTCTGATG ATTGTACTTA TTTCAGTTGC GATAAATCTG GCTTTAAAAT ATATCCCTCT CTTTAGCTTT ATTTCAAGCG GTTTTGCTAT TATTATTTCC ACCGTACTTG GTGCCGGAAT CGGTGCCGCC ATATGGCCCA TAAAAGAAGA AAATCCCGTT TTAAAGGAGG AGTAA
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Protein sequence | MNKSQTKIND FVYGFKKGTP ILLGYIPVAF TFGLMAVGGG LHPLMAVFIS LTNLTSAGQF AGTNLIIQGA GYLEIALTTF VINIRYMLMS LSLSQKIDPK ITLWQRLVFG FGITDETFSV ASMEKGRLSY FYMLGLIAGP IFGWSFGTAL GAFTSSALPE SLSNAMGIAL FAMFIAIIVP PAKKSRPVLM IVLISVAINL ALKYIPLFSF ISSGFAIIIS TVLGAGIGAA IWPIKEENPV LKEE
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