Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1396 |
Symbol | |
ID | 4809057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1704901 |
End bp | 1706445 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640106819 |
Product | phospholipase D/transphosphatidylase |
Protein accession | YP_001037820 |
Protein GI | 125973910 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.704033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTCAA GGATAAAATC TATTGTAAAA TTTTTGTATC ACAGAGTTGT TTTAATATCT TTGGCAATAC TTATACAGTT GATTGCTCTT GTAAGTGTTG TATTGAAGTT TAACGACTAT TTTGTGTTCT TCTATTGGGC ATGCCTGATT ATAAGCATGA TTGCAGTATT TTTGATTTTG AACGGAAAAA GCAATCCCTC CTACAAAATT GCATGGATTA TTCCGATACT TTTGTTTCCT ATTTTTGGCG GATTGTTCTA TATTTTTTTC GGAGGAAAGA AGCTTAGCAG GCGCGAGAGA AGAAAGCTGA AATCCATTGG TATGAAGGTG GAGAATGCTT TGGTGCTGCA GCCGGAGGTT TTAAGTGAAA TAATGCTGCA TGACGACGGC GCGGCCGTTC AGTCAAGGTA TATTCAAAAT GTAGCCCACT ATCCTCCCCA TAAAAATTCC ACGGCGGAAT ACCTTTCCAT CGGAGAAAAA AAGTATGAAA AGCTTAAGGA GGAACTTAAA AAAGCAAAGC ATTTTATATT TATGGAGTAT TTTATCATTC AGGAAGGAAT TATGTGGAAC AGTATATTGG AGATACTGGT GGAGAAAGCA AAAAATGGGG TAGATGTTCG TCTTATCTAC GATGATATGG GGTGTTTGCT GTTTTTGCCG CGAAATTACA ACAAAAAGCT TGAAAGTATG GGAATCAAGT GTTGTGTTTT TAACCCTGTG TCTCCGATAT TGTCTGCCAA AATAAACAAC CGGGATCACC GGAAAATAGC GATAATTGAC GGGCATACGG CTTTTACCGG CGGCATCAAC CTTGCAGACG AATACATCAA TGAGATTAAA AAGCACGGAC ACTGGAAAGA TACTGCCATA ATGATAAAAG GGGAAGCCGT ATGGAACATG ACGGTAATGT TTTTGTCTAT GTGGGATTAT CTTAGGGGGA TTGAGGAAGA TTTTGAAAAG TTCCGCTATA AGTTTAAAAA AGAAAGTGAA ATTGAGGACG GATATTTTCA GCCGTTTTCA GACAGTCCTT TCGATGATGA GACTGTTGGT GAGACAGTAT ATTTAAACCT TTTGAACAAA GCAAAAAGAT ATGTTTATAT TACAACACCC TATCTTGTTA TTGACTACAA AATGACACAG GCATTGGCTT CGGCAGCGAA ATCCGGAATA GATGTCCGGA TTATAACTCC CCATATAGAG GATAAATGGT ATGTCCATGC CGTTACAAGG TCAAATTACC GCTTTCTGGT TGAAAGCGGC GTAAAAATCT ATGAATACAC ACCGGGATTT ATTCATTCCA AAACCTTGGT TTCCGATGAC GAATATGCGG TTGTGGGCAC GATAAACATG GATTACAGAA GTTTCTATCT GCATTTTGAG TGTGGTGTCT GGACATACAA GAGCAAAAGT GTGCTTGACA TAAAAGAAGA TTTCCTAAGC ACCCTTGACG TGTGTACGGA AATAACAATG GATATGATTA AAAAGACAAA ATGGTATAAA ACCCTGATTG GTACCCTCCT GCGTGTCTTT GCCCCTCTTA TGTAG
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Protein sequence | MWSRIKSIVK FLYHRVVLIS LAILIQLIAL VSVVLKFNDY FVFFYWACLI ISMIAVFLIL NGKSNPSYKI AWIIPILLFP IFGGLFYIFF GGKKLSRRER RKLKSIGMKV ENALVLQPEV LSEIMLHDDG AAVQSRYIQN VAHYPPHKNS TAEYLSIGEK KYEKLKEELK KAKHFIFMEY FIIQEGIMWN SILEILVEKA KNGVDVRLIY DDMGCLLFLP RNYNKKLESM GIKCCVFNPV SPILSAKINN RDHRKIAIID GHTAFTGGIN LADEYINEIK KHGHWKDTAI MIKGEAVWNM TVMFLSMWDY LRGIEEDFEK FRYKFKKESE IEDGYFQPFS DSPFDDETVG ETVYLNLLNK AKRYVYITTP YLVIDYKMTQ ALASAAKSGI DVRIITPHIE DKWYVHAVTR SNYRFLVESG VKIYEYTPGF IHSKTLVSDD EYAVVGTINM DYRSFYLHFE CGVWTYKSKS VLDIKEDFLS TLDVCTEITM DMIKKTKWYK TLIGTLLRVF APLM
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