Gene Cthe_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1379 
Symbol 
ID4809374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1683369 
End bp1684457 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content40% 
IMG OID640106803 
Productoxidoreductase-like protein 
Protein accessionYP_001037804 
Protein GI125973894 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTCGTCTTGC TGTAATAGGT ACGGGAATGG CCTGGGAAAG ACTTCATTAT 
CCTGCCATTA AAGAACTTGA AGACAAATAT GAAATAGTTG CGTTGTGCAA TCGGACCCGC
AAGGATGCCG AAGAATTTGC GAAAAAAATA AACTTAAGCA TGGACAGGGT TTACGATGAT
TACAATGAAA TGCTCAAAAG ACAGGATATA GATGCAGTAG ATATCCTTGT GCCTATTGAA
TCCAACTATA CGGTTTCGGA AGCCGTTGCA AAAGCCGGCA AGGACTTTAT TTGTGAAAAA
CCTCTTGCTG CAAACAGGGA AGAGGCAAAA AAATATCTGG AACTTTCAAA AAAATACAAT
GTAAGAATCA TGATAGCCGA AAACTACAGA TACAGCGACG AGTACAACAA AATCAGGGAT
ATAGTAAACA GCGGAAAAAT CGGGGATGTG GTATACTTTA TAAAAAACAA CATATCCTGC
TTCCCCTGTG AAATGACAAA AGATACCTTC GCCGCCACCG AATGGAGACA GCATCCCAAA
TTCTACGGAG GTGCTTTTTT GGACGCAGCA GTGCATGATA TTGCGGCAAT GAGGCATATT
TTCGGTGCGG TTGAATGTGT ACAGGCTTTT GGAAAACCAC AGGCAGAAGA TTTCAATCCG
TATGTGTCAG TAAACGCTCA TATTCTCTTT AAAAACGGAG TCATAGGGTA TTATACGTAC
TATCCTTCGG GCATTGAAAC TCAAAAGCCG GCGGTAGGCT TTAGAATCTT CGGCACCAAA
GGCGAAATAT ATCTTGAAGA CAAGACATGC GGAATAATAA ACGTGTCATA TCATGACGGT
ACTTCGGAAC TTGTAAACTT TATTCCCGAA CGGGGCTTTT ACAACGAACT TTTAAATTAC
TACAACGCCA TAAACGGTAC GGAACAAATA TCTGTAACCC CTGAGATGGA ATATGGGGAT
GTCAAAATGG TTTTTGACAT TTTGGACTCT GTATCCTTCC GGGAAATCAT ATATGTGGAT
GAAGAAGAAC CAAAAAGGCG GCTGGAAATT GCCGATGATG AAGCAAAAAT ACATCCTTTC
CTTCAGTAA
 
Protein sequence
MKKIRLAVIG TGMAWERLHY PAIKELEDKY EIVALCNRTR KDAEEFAKKI NLSMDRVYDD 
YNEMLKRQDI DAVDILVPIE SNYTVSEAVA KAGKDFICEK PLAANREEAK KYLELSKKYN
VRIMIAENYR YSDEYNKIRD IVNSGKIGDV VYFIKNNISC FPCEMTKDTF AATEWRQHPK
FYGGAFLDAA VHDIAAMRHI FGAVECVQAF GKPQAEDFNP YVSVNAHILF KNGVIGYYTY
YPSGIETQKP AVGFRIFGTK GEIYLEDKTC GIINVSYHDG TSELVNFIPE RGFYNELLNY
YNAINGTEQI SVTPEMEYGD VKMVFDILDS VSFREIIYVD EEEPKRRLEI ADDEAKIHPF
LQ