| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1367 |
|---|
| Symbol | |
|---|
| ID | 4809362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1660084 |
|---|
| End bp | 1660860 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640106791 |
|---|
| Product | PHP-like protein |
|---|
| Protein accession | YP_001037792 |
|---|
| Protein GI | 125973882 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0119686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTAG ATATTCATTG TCATGTTCTT GATGATATAG ATGATGGACC GAAAACATTG
GTCGAAGCCC TATCATTATG CAGAATGCTT CAAACGAGGG GCATTGACAA AGTTATTGCC
ACACCGCATT TTATTGGAGA TTATGATTCA AAAGTGACTC CTAAAAGTGT AAAAGAGAAG
ATAGATATTT TAAATAAAGA AATGAAAAAA CAACATATCA AGTTGGAGAT ATATTCCGGA
ATGGAGGTTT TTGCATCCAA CGATACTGTT GACAGGCTGG AAAAAGGGGA AATTTTAACG
TTAAACAATT CCAGATATGT GCTTATAGAG TTTTCTTTTG AAAATATTCC TAAATATATG
TCCGAACTTT TATTTTCCAT GCAGCTTAAA GGATATGTGC CCATAATTGC ACATCCGGAA
CGTTATAACA TTCGTTACCG CAAGAGCGGC ATTATTAAAA AGGCAGTGGA AAACGGAGCG
CTTCTTCAAG TGAATTCAGG AAGCATTATG GGAGTACATG GCTCTGAAGT CCGGGATGAA
GCAATCAGGC TTTTAAAGAG CGGAATGGTT CATCTTGTTG CTACTGATGC TCATGGAGAC
AGAAGACCAA TCTATTCTGT GATGGAAATT CAAAAAAAAC TTACAGAAAT TTGTGGAACT
GAAAATATGA AAAAACTTCT TTATATTAAT CCTCAAAGAG TTTTTGAAGA TAAAGACGTC
GAACAAACAA GTGTTGTAAA AAAAAGTTTT TCCATATTCA GCTTTTTCAA AAAATGA
|
|---|
| Protein sequence | MIVDIHCHVL DDIDDGPKTL VEALSLCRML QTRGIDKVIA TPHFIGDYDS KVTPKSVKEK
IDILNKEMKK QHIKLEIYSG MEVFASNDTV DRLEKGEILT LNNSRYVLIE FSFENIPKYM
SELLFSMQLK GYVPIIAHPE RYNIRYRKSG IIKKAVENGA LLQVNSGSIM GVHGSEVRDE
AIRLLKSGMV HLVATDAHGD RRPIYSVMEI QKKLTEICGT ENMKKLLYIN PQRVFEDKDV
EQTSVVKKSF SIFSFFKK
|
|---|
| |