| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1337 |
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| Symbol | |
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| ID | 4809477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1627962 |
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| End bp | 1628831 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106761 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001037762 |
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| Protein GI | 125973852 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTCG GTTTAATAGT TTTTGGTTTG GTTTTGATGC TTTTTATGCT GTTGTTTTTA
ATTTCGAGCA AGAGGTATAG CGATTATATT GAGCCGTTGG ACAGTAGTGA GTACAAGTTG
AAGAGATTGC TGCCCGTAGG GCTTTGTATC CTTGACATTA TAAAATACAA ATATACTTCC
AAATACGACA GGATGCTTCA GTCGAAAGTC GCTGAACTTA AGGGCATGAA ATATTCTGTG
TATTATTTGC AGATTCATCA TGCCAACAAG ATTGTTCTCA TGTTTTTAAT GTTGCTTTTG
TTTTCTTTGC TCTCTGCCGT AACGCAGGAT GTTGCAACCT TGGTGTTTGG AATTGCGGTA
ACGGCGGCCG TTCCGTATTT TATGGACAGG GAGCTTAGTG GGAAAGTTAA CAGAAGAAGG
CTTAGCATAC AGCTTGACTT TCCTGACTTT TTAAACAAGG TTATTTTGCT TGTGAACGCG
GGTATGACGG TTTCAAGAGC CTGGGAGAAG TCTGTAACCG ACAGTGAAAA GGATACTGTT
TTATATCAGG AATTGAGAAC GGTTTTGGCG GATATCAGGG GAGGTAAATC GGAGACAAGC
GCTTTTGAGG ATTTTGCCAA CAGGTGCAGA ATCCCTGAAA TAACCAAATT CGTATCAGCA
CTTTTGCAAA ATCTTAACAA AGGTAATGCG GAGATGGTGT CTATTTTAAG ACTTCAGGCT
GCAGAGTGCT GGGAGATGAG GAAGCATGCG GCCAAAAGGC TTGGAGAGGA AGCTTCCACA
AAAATGTTGT TTCCCATGAT GCTTATGTTT ATAGCCGTGA TTCTGATTGT TGCGACTCCG
GCGGTTTTAA CACTGACCGG CAGCATGTGA
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| Protein sequence | MIVGLIVFGL VLMLFMLLFL ISSKRYSDYI EPLDSSEYKL KRLLPVGLCI LDIIKYKYTS
KYDRMLQSKV AELKGMKYSV YYLQIHHANK IVLMFLMLLL FSLLSAVTQD VATLVFGIAV
TAAVPYFMDR ELSGKVNRRR LSIQLDFPDF LNKVILLVNA GMTVSRAWEK SVTDSEKDTV
LYQELRTVLA DIRGGKSETS AFEDFANRCR IPEITKFVSA LLQNLNKGNA EMVSILRLQA
AECWEMRKHA AKRLGEEAST KMLFPMMLMF IAVILIVATP AVLTLTGSM
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