Gene Cthe_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1253 
Symbol 
ID4809758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1518716 
End bp1521298 
Gene Length2583 bp 
Protein Length860 aa 
Translation table11 
GC content41% 
IMG OID640106676 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001037678 
Protein GI125973768 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCTT TTGAAAGGGT TAGATCAGGT ATACCGAGTT TGGACAAGGT TCTTGACAAC 
ATAAGACTTG GAGATAATGT GGTCATACAG GTAACTTGTT TGAATGATTT TAAAAGAATA
GTGCATCCCT TTGTAAATCA ATCCATTGAG GACAAAAGAA ATATTATTTA TATCCGTTTT
TCCAACCATG AACCTTTACT GGAATACATG GACGGGCTGA AAATTTATCA GCTGAATGCC
AATCGAGGGT TTGAGGCCTT TACGGTTGAG GTCCACAATA TAATTGATAA GGAGGGAAGG
GAGGCATTTT ATGTGTTTGA TTCCCTTTCC GACCTGCAGG TTGCCTGGTC CACAGACTTG
ATGATGGGAA ATTTCTTTTG TGTAACCTGC CCCTATTTGT TTGAACTTGA CACTGTGGCA
TTGTTTCCTG TACTGAGAGG GCATCACGAT TTTGCAACAA TTGCCCGTAT TCAGGAGACA
ACACAGCTGT TTATTGATGT GTATTCGGAC GAAAAAGATA CGTTTATACA TCCTATTAAA
GTTTGGAACC GCTATTTGCC TGACATGTAT ATGCCTTACA GGCTGAATGA CGACAACGAG
CTGGAATCCC TGACCGGCAG TGTGGATTTG GCAGATTACT ACAATCTTAT TCATAATGAG
CAAAAGAGGC ACGCCGAGCA GAATATTGAC AGTTATGAAA GGTTTTTCAG GGAGGCCAGG
GAAGCTTATT ACAGGGGTGA AATTACAGAC TGGACTCTTA ATAAAATAAC CCGCAGCATG
ATGACCCGCG ACCACAGAAT GGCTGATTTG ATAAGAAAAG AATTCAGTCC TGAGGATTAT
TTCCATATCA AAGAAAGAAT GATCGGTACC GGAACAATTG GGGGAAAGGC ATGTGGTATG
CTTTTGGCAA GAAAAATGGT TGCAAACTAC CTGCCTCAGT ATGTAAAGTA TTTGGAGCCT
CAGGATTCCT ATTATATCGG AACTGATATC TTTTATTCAT ATATCGTGGA AAACAAACTC
TGGAAATTAC GTATTTTACA GCGTAATGAC AAGTATTATT TTGAAAAGGC GGAAGAACTG
AAAAATGCGA TATCAAACGG TAAATTTTCC GAGCCCATTA GGGCGCAATT CAGAAGAATG
CTGAACTATT TCGGACAAAT TCCTATCATT GTGCGTTCGA GCAGTTTCCT GGAAGACGGA
TTTGGAAATG CTTTTGCGGG AAAATACGAG TCGATTTTCT GCGTAAACGC ATGCGATCCG
GAAGAAAGGC TTTTGCAATT TGAAGACGCG GTGCGCAGGG TATATGCAAG CACGATGGAC
AGGTCTGCTT TGGAGTACCG CAGACAACGG GGACTTGATA AAATGGACGA GCAAATGGCG
ATTTTGGTGC AGCGTGTCAG CGGAACGAAA TTTGACAAAT ATTATATGCC ATGTGCTGCG
GGAGTTGGTT TTTCCTATAG TGTATACCGC TGGAGTGATG AATTTAGTGC AGATGCGGGA
CTTCTGCGTT TGGTTGCAGG TCTGGGTACA AAGGCGGTGG ACAGAACGGG TGTCGATTAT
CCCCGGCTGG TAAACCTGGA TAATCCTGAA AGTACCATTT TAACGAGGTC GAGTGATAAA
CATCGTTTTT CACAGCGAAG AGTGGATGTT ATTGATTTAC AGAAAAATGA AGTAAGAGAT
ATTGATGTAA GTGAACTGAT TCCTGAGCTT CCGGATTGGT ATGTGAATCT TGTCTGTGAG
CATGATTATG ATACTGAGAG AATGTTTTAT GAAAGAGGAC AGAGACGAAA TGTTCTTTTT
GTTTCGTGTG ACGGGATTGT TAAGAAAAGA GAGCTTATGA AAATGATGAA AGATATTCTT
TCCACTCTTC AGGAGCATTA CGGAAATCCT GTGGATGTGG AATACACAAT TAATTTCAGA
AAGGACGGAG CATTTACCGT AAATCTTCTT CAGTGCAGGC CCATGGCTGT ATGGGAGAGT
GCTGCCAATC GGGAAATTCC GAATATTGAA AAAGATAAAG TTCTGTTTAA AGTTAATCAG
ACTTTTATGG GGAATTCCGC AGAGTTGAAC ATTGATGTGG TTGTGTGGAT TGACTCAAAA
AAGTATCATG GTTATCCTTA TAATCAGAAA AGCTCTTTGT GCAGTGTAGT CTCTAAAATT
AACAAATATT ATGAAGGAAA GAATAAGAAA CTGATGCTTG TAAGCCCGGG GCGAATTGGG
ACTTCATCCC CTGAATTGGG AGTTCCGGTT GTGTTTTCGG ATATATCCAA TTTTAAAGTC
CTATGCGAGT ATGCGGATAT TGAAATTGGA TTTGTTCCTG AGTTGTCTTA TGGCAGTCAT
ATGTTTCAGG ACATAGTTGA AACGGAAATG TTTTATGTGG CGGTAATGGG CACCGAGCGA
AGCGGTACCG AAGTATTTAA CAAAGAGTTT TTCAAAAATG AGCCTTCGGT TCTGGGTAAG
ATTGTTCCTG AAGCTGAAGC ATATGAAGAT ATCATCAAAG TATATGAATT TGGTGTTTCA
AAATCACTAA GCCTCTATGC TGATTTTAAG AAAAGAACTG CAGTTTGCGG TGTAAATTCT
TAA
 
Protein sequence
MPAFERVRSG IPSLDKVLDN IRLGDNVVIQ VTCLNDFKRI VHPFVNQSIE DKRNIIYIRF 
SNHEPLLEYM DGLKIYQLNA NRGFEAFTVE VHNIIDKEGR EAFYVFDSLS DLQVAWSTDL
MMGNFFCVTC PYLFELDTVA LFPVLRGHHD FATIARIQET TQLFIDVYSD EKDTFIHPIK
VWNRYLPDMY MPYRLNDDNE LESLTGSVDL ADYYNLIHNE QKRHAEQNID SYERFFREAR
EAYYRGEITD WTLNKITRSM MTRDHRMADL IRKEFSPEDY FHIKERMIGT GTIGGKACGM
LLARKMVANY LPQYVKYLEP QDSYYIGTDI FYSYIVENKL WKLRILQRND KYYFEKAEEL
KNAISNGKFS EPIRAQFRRM LNYFGQIPII VRSSSFLEDG FGNAFAGKYE SIFCVNACDP
EERLLQFEDA VRRVYASTMD RSALEYRRQR GLDKMDEQMA ILVQRVSGTK FDKYYMPCAA
GVGFSYSVYR WSDEFSADAG LLRLVAGLGT KAVDRTGVDY PRLVNLDNPE STILTRSSDK
HRFSQRRVDV IDLQKNEVRD IDVSELIPEL PDWYVNLVCE HDYDTERMFY ERGQRRNVLF
VSCDGIVKKR ELMKMMKDIL STLQEHYGNP VDVEYTINFR KDGAFTVNLL QCRPMAVWES
AANREIPNIE KDKVLFKVNQ TFMGNSAELN IDVVVWIDSK KYHGYPYNQK SSLCSVVSKI
NKYYEGKNKK LMLVSPGRIG TSSPELGVPV VFSDISNFKV LCEYADIEIG FVPELSYGSH
MFQDIVETEM FYVAVMGTER SGTEVFNKEF FKNEPSVLGK IVPEAEAYED IIKVYEFGVS
KSLSLYADFK KRTAVCGVNS