Gene Cthe_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1226 
Symbol 
ID4809918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1466748 
End bp1467251 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content39% 
IMG OID640106649 
Productdihydrofolate reductase 
Protein accessionYP_001037651 
Protein GI125973741 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00227067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTA TTGTTGCGGT TGATTCTAAC TGGGGAATTG GATATAAAGG GAATCTGCTT 
CAACGTATTC CCGAGGATAT GAGATTTTTC AGGCAGATGA CTTTGAATAA AGTTGTGGTA
ATGGGAAGGA AGACGTTTGA ATCGTTGCCC GGAAAAGAAC CTTTAAAGGA TAGGGTAAAT
ATAATATTAA GTAAGAGTGA AAACATTGAA AAAGACGGAA TAATAATATG TCGTTCCGTT
GACGGGCTTT TTTTGGAGCT TAAAAAATAT AACTCCGATG ATATTTTTGT AATAGGCGGA
GAAGAGGTAT ACACACAGCT GTTGCCATAT TGCTCCGAGG CTCATGTTAC CAAATTTAAC
GGTGCGTATT CTGCAGACAG ATATTTTCCC AACCTCGATG AAATGGAAGG GTGGAAACTG
GTTTGTGTGG GCGAGCCGAA GGAGTTTAAC GATATCCGGT ATAACCGCTT GAAATATGTA
AACGAAAATC CCAAAGTATA CTGA
 
Protein sequence
MKAIVAVDSN WGIGYKGNLL QRIPEDMRFF RQMTLNKVVV MGRKTFESLP GKEPLKDRVN 
IILSKSENIE KDGIIICRSV DGLFLELKKY NSDDIFVIGG EEVYTQLLPY CSEAHVTKFN
GAYSADRYFP NLDEMEGWKL VCVGEPKEFN DIRYNRLKYV NENPKVY