| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1178 |
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| Symbol | |
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| ID | 4810130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1406068 |
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| End bp | 1406793 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640106600 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001037603 |
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| Protein GI | 125973693 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000195875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTATG TGGAAGTTAT AATGTCAATA AAGGATGAGG GGGAATTTTT TATGAAGGTT
TTGCAAAAGA ATGAATTTTT ACAAAAGAGC AATGAAACTT TGGCATCAAT TTTAGATATG
CTTGAAAAAC TTCCTGTTGT AAAATTTGAT GAAATTGAGG CCGATAAAGC CGTTTTGGTT
ATTATTGACA TGACCAACGG TTTTGCAAAA GAAGGGGCGC TTAAAAGCGA TGCCGTAAAA
GAGCTTATAC CCAGGATATG TGAGCTTAGC GAAATTTGTG ATAGGCGAAA AATACGAAAA
ATTGCCTTTG CAGACTGTCA TACCGATGAA TCACCGGAAT TTGACGCGTA TCCAAAACAT
TGCATGAAAG GTACGGCGGA AAGTGAAATA GTGGATGAAA TAAAAAATAT CGGGGGATAT
ACTCTTATAG AAAAAAATTC TACCAACGGA TTTTTGGAAG AAGCTTTCAG AAAGTGGCTT
TTGGAAAATC CCGATATCAA CACCTTCATA TTGACGGGAG ATTGCACCGA TATCTGTGTA
CAACAGTTTG CTATTACACT TAAGGCTTAT TTTAACATGA ATAATAAACG GGCAAGAGTA
ATCGTTCCGT TGAATGCGGT TGATACCTAT GACTTGGGAG TGCACGACAG AAACCTTATG
AATGTTATGG CAGCATACAA TATGATAATC AACGGGGTCG AGGTTGTACG GGATATTGTT
GAGTAG
|
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| Protein sequence | MKYVEVIMSI KDEGEFFMKV LQKNEFLQKS NETLASILDM LEKLPVVKFD EIEADKAVLV
IIDMTNGFAK EGALKSDAVK ELIPRICELS EICDRRKIRK IAFADCHTDE SPEFDAYPKH
CMKGTAESEI VDEIKNIGGY TLIEKNSTNG FLEEAFRKWL LENPDINTFI LTGDCTDICV
QQFAITLKAY FNMNNKRARV IVPLNAVDTY DLGVHDRNLM NVMAAYNMII NGVEVVRDIV
E
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