Gene Cthe_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1169 
Symbol 
ID4810121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1394838 
End bp1395989 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content37% 
IMG OID640106591 
ProductBeta-lactamase class A-like protein 
Protein accessionYP_001037594 
Protein GI125973684 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTATTA TATGTATTCG CAAAAAGAAT TCTGTAAAAG AAAGAATTTG CAAGATACTG 
AAAGGTAAAA TAAGAAACTA TTTTGTGCTT GTGGTCACAT TCTTCATGGG TGTGGCGTTT
GTTATGTACA GTGGCAATTT GGCAAGTATG GGCATGAAAA GCAATGAATA TAACAAGGGC
AATTATGAAG CCCATAAAGC TTACTATGCC GGAACTTACG AATATGGTAC TGATTATGAT
GTTGAGGATG ATTTGTATTC TTTGGAATTT GATGATGAGC TTTTAAATGA TGAGCTTGAA
TATCTTGAGG ATATCGGAGA GCCCTTTTAC TATGAAGACT TGGATAACGA TTTTGACAAC
ACCCTTGAAA ATCAGGTAGA GAAGGATACT TACGCAGCTT TGGAAAACAA GCTTCGAAAA
TACATATCAA AATACAACTG TTATTTTGGA ATATATTTTG TTGACCTGGA AAGCGGAAAA
GAATTTGGTA TTAATGACAC GGAAGAGTTT TTTGCTGCGA GCACTTTCAA AATTCCTTTG
AATTTGTATG TTTATGACAT GATAAGAAAA GGAATGCTTG ATCCTATGAC TTCTTTGGAA
TATACCGAGG AAGATTTTGA AGGTGGTACA GGAATTATTT GGAATAATGA GTCTTTTGGG
AAAACTTTTA CCATAAAGGA GCTGCTCAGA CTCTCAATAG TATATAGTGA CAACGTTGCG
GTAAACATGT TGCTTCGATG TGTTGGGAAA GCAAATGTCA AGGAATATAT GCGCAGGTTG
GGCGGAGTCG TGGTTGATGA CGGGAAAAAT GTGTCATGTC CCAGGGATAT GGCGATGTAC
TTAAAAGAAG TGTATGAACT TTCTGAAAAC GGTGACCCCT GGGGCAGGGA ACTTGTACAA
AACATGATAA ACACGAAATT TTACGACCGG CTTCCGGTAT TGCTTCCGAA AAACCTAAAA
ATTGCACACA AAACCGGAAA CTATACCGGG GTTGTACATG ACGTCGGGAT TGTTTATGCC
GAAAAGCCGT ATATAGTTGT TGTTATGACA AAGAATGTGA AAAACGGACA ATCGGCCAAT
AAAGCAATAG CAAATATTTC AAAAATGATT TACGATTATG TTGTAAAGCA ATCGGGAAAA
GATCTTGATT AA
 
Protein sequence
MFIICIRKKN SVKERICKIL KGKIRNYFVL VVTFFMGVAF VMYSGNLASM GMKSNEYNKG 
NYEAHKAYYA GTYEYGTDYD VEDDLYSLEF DDELLNDELE YLEDIGEPFY YEDLDNDFDN
TLENQVEKDT YAALENKLRK YISKYNCYFG IYFVDLESGK EFGINDTEEF FAASTFKIPL
NLYVYDMIRK GMLDPMTSLE YTEEDFEGGT GIIWNNESFG KTFTIKELLR LSIVYSDNVA
VNMLLRCVGK ANVKEYMRRL GGVVVDDGKN VSCPRDMAMY LKEVYELSEN GDPWGRELVQ
NMINTKFYDR LPVLLPKNLK IAHKTGNYTG VVHDVGIVYA EKPYIVVVMT KNVKNGQSAN
KAIANISKMI YDYVVKQSGK DLD