Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1169 |
Symbol | |
ID | 4810121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1394838 |
End bp | 1395989 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640106591 |
Product | Beta-lactamase class A-like protein |
Protein accession | YP_001037594 |
Protein GI | 125973684 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTATTA TATGTATTCG CAAAAAGAAT TCTGTAAAAG AAAGAATTTG CAAGATACTG AAAGGTAAAA TAAGAAACTA TTTTGTGCTT GTGGTCACAT TCTTCATGGG TGTGGCGTTT GTTATGTACA GTGGCAATTT GGCAAGTATG GGCATGAAAA GCAATGAATA TAACAAGGGC AATTATGAAG CCCATAAAGC TTACTATGCC GGAACTTACG AATATGGTAC TGATTATGAT GTTGAGGATG ATTTGTATTC TTTGGAATTT GATGATGAGC TTTTAAATGA TGAGCTTGAA TATCTTGAGG ATATCGGAGA GCCCTTTTAC TATGAAGACT TGGATAACGA TTTTGACAAC ACCCTTGAAA ATCAGGTAGA GAAGGATACT TACGCAGCTT TGGAAAACAA GCTTCGAAAA TACATATCAA AATACAACTG TTATTTTGGA ATATATTTTG TTGACCTGGA AAGCGGAAAA GAATTTGGTA TTAATGACAC GGAAGAGTTT TTTGCTGCGA GCACTTTCAA AATTCCTTTG AATTTGTATG TTTATGACAT GATAAGAAAA GGAATGCTTG ATCCTATGAC TTCTTTGGAA TATACCGAGG AAGATTTTGA AGGTGGTACA GGAATTATTT GGAATAATGA GTCTTTTGGG AAAACTTTTA CCATAAAGGA GCTGCTCAGA CTCTCAATAG TATATAGTGA CAACGTTGCG GTAAACATGT TGCTTCGATG TGTTGGGAAA GCAAATGTCA AGGAATATAT GCGCAGGTTG GGCGGAGTCG TGGTTGATGA CGGGAAAAAT GTGTCATGTC CCAGGGATAT GGCGATGTAC TTAAAAGAAG TGTATGAACT TTCTGAAAAC GGTGACCCCT GGGGCAGGGA ACTTGTACAA AACATGATAA ACACGAAATT TTACGACCGG CTTCCGGTAT TGCTTCCGAA AAACCTAAAA ATTGCACACA AAACCGGAAA CTATACCGGG GTTGTACATG ACGTCGGGAT TGTTTATGCC GAAAAGCCGT ATATAGTTGT TGTTATGACA AAGAATGTGA AAAACGGACA ATCGGCCAAT AAAGCAATAG CAAATATTTC AAAAATGATT TACGATTATG TTGTAAAGCA ATCGGGAAAA GATCTTGATT AA
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Protein sequence | MFIICIRKKN SVKERICKIL KGKIRNYFVL VVTFFMGVAF VMYSGNLASM GMKSNEYNKG NYEAHKAYYA GTYEYGTDYD VEDDLYSLEF DDELLNDELE YLEDIGEPFY YEDLDNDFDN TLENQVEKDT YAALENKLRK YISKYNCYFG IYFVDLESGK EFGINDTEEF FAASTFKIPL NLYVYDMIRK GMLDPMTSLE YTEEDFEGGT GIIWNNESFG KTFTIKELLR LSIVYSDNVA VNMLLRCVGK ANVKEYMRRL GGVVVDDGKN VSCPRDMAMY LKEVYELSEN GDPWGRELVQ NMINTKFYDR LPVLLPKNLK IAHKTGNYTG VVHDVGIVYA EKPYIVVVMT KNVKNGQSAN KAIANISKMI YDYVVKQSGK DLD
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