Gene Cthe_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1117 
Symbol 
ID4811415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1333074 
End bp1333919 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content36% 
IMG OID640106539 
ProductTn7-like transposition protein A 
Protein accessionYP_001037542 
Protein GI125973632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC GGAAAATAGA TTGGGATGAA AATAAATTAA AAAAATGGAT ACAGGAAGGA 
AGAGGACAGG GGGAAGGCAA GGATTACAAG CCCTGGCTTA CTGTACAGGA CTTTCCCAGC
AAAGGAAGGG TTACACGTGT ATTTGGATGG AAAACAAAAA GAATTCATCA TTTTTTTACG
GATTCGGAAG CACGGTATTT TTATCTGTTG GAATGGGAGG ATGATGTTTT AGATATCAGG
GAACATTACC CCTTATTTGA TTGTGAAGAA GTAATGCAAA ACAAGGCTGG CTTAAATTTT
AATTTATTTA AAGACAAAGA TACAGGAACG CCATACATTT TATCTACATC ATTTTTAATA
ACCTTGAAAA AACCAAACGA TAAAATAGTA TATGTTGCCA GAAGTCTTAA AGCAGACTAT
GAACTTGAGC GCAAAACAGC ATTAGAAAGG TTGGAAATAG AGAGGAGATA CTGGCAGAGC
CAAAATATTG ATTGGGGAAT AGTAACACAA AAAGAGATTC CAGTGGTTAA GGCAAAGAAC
ATCGAATGGA TTCACTCATC CTTGTATCCT TCCGATGAAA GAGGACTTAC AGATGAAGAG
GTTGACTATT ACTGTAATGC TTTTATTGAC AAATTGGAAG GAAGTAATAC ATCGATTAGA
AATTTCACTG TGCAGTTTGA CAGGCTGTTT AATTTGGACA CAGGTACAGG GATATACATA
TTTAAGCGCT TAATTGCCCT TAAAAAGATA ATGGTGGACA TGAATAAAAA AATCGACCTT
AATAATTCGA CCCGGAGTAT AGAAATCATA AATCCCAGTT TAACAGAAAG GGTGAGAGTT
CTATGA
 
Protein sequence
MAKRKIDWDE NKLKKWIQEG RGQGEGKDYK PWLTVQDFPS KGRVTRVFGW KTKRIHHFFT 
DSEARYFYLL EWEDDVLDIR EHYPLFDCEE VMQNKAGLNF NLFKDKDTGT PYILSTSFLI
TLKKPNDKIV YVARSLKADY ELERKTALER LEIERRYWQS QNIDWGIVTQ KEIPVVKAKN
IEWIHSSLYP SDERGLTDEE VDYYCNAFID KLEGSNTSIR NFTVQFDRLF NLDTGTGIYI
FKRLIALKKI MVDMNKKIDL NNSTRSIEII NPSLTERVRV L