| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1114 |
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| Symbol | |
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| ID | 4811412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1327372 |
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| End bp | 1329258 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640106536 |
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| Product | Tn7-like transposition protein D |
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| Protein accession | YP_001037539 |
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| Protein GI | 125973629 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACGT TTTTTCCTGT GCCATATGAG GATGAAGTAT TATACAGCGT CCTTGCAAGA
TACCATGTGA GGAGTGGAAA TATAAGTTAT AAGGCGACAA TGAGAGACCT TTTCGGGTCA
ACTTCCGTAA CAGCGGTGAT GGACTTGCCT TCAAATATAC ATAACCTCGT CAATAATATG
CCCCTTAATT CCAGGTATAC CGAAGAATAT CTTATTAAAA ATCATACACT TTTTCCGTTC
TATTCTGCTT TCTTGCCTCC TGAGCGTGCA GAACAAGTTT TTCAATCAAT GAAAGGGGAA
AATGGAGGAA GCATATATAC CCGGACTGGA ATTATGGCCA GTTCTATAGT ATTAAACCAG
TATTTTAAGT TTTGTCCTAC ATGTACTGAA GAAGATAAGT TGCAGTACGG AGAGTTATAC
TGGCATAGAG TTCATCAAAT TTCTGGAGTA CTGGTATGCC CAAAACATTA TGTTCCTTTA
TATAATAGCC TGGTACCGGT CAGGGGATAT AATAAATACC AATATAAGGC TGCTAGCGAA
GAGAACTGTG TAAAGCCAGA TATTAATGTG ATATACGCTG ATGATGTTTT TGAAAAACTG
GTTAGGCTTG CAGAGGATGC TCAGGTTTTA CTTAACAGTG ATTTTGAAAA GAGAAATATA
GAATGGTATA AAGAACAGTA TCTTGCAAAG ATGATGGAAA TGGGATTTGC AACTGTGAAT
GGGAAAGTGT ACCGAAAGAG GCTTATAAAA GAGTTTATTA ATTATTATGG TGAAGAATTT
TTAGATATGG TGCAGTCCAG TGTTGATGTA GATAACGATT CAAATTGGCT AATGGATATG
ATAAGAAAGA AAAACAAGAC TGCTCATCCA ATAAGACATT TGCTTTTGTC ACAGTTTCTT
GGTATTTCAC TTCAAGATTT ATTTAATAAA AAGATGGAAT ATAAGCCTTT TGGAGATGGA
CCATGGCCTT GCTTGAATGC AGCATCAGAC CACTACCTAA AGCCGGTTGT TTCTGATTTA
AAAGTTGCAT ACAGTACGGA TTCAAAATGT CCTGTTGGGA CTTTTTCTTG TACTTGCGGT
TTTGTTTATA CAAGAAGTGG GCCAGATGAG TCTGAAGATG CAAGATATAG GTTCGGAAGG
ATAAAAAAGT TTGGACAAGT ATGGGAGGAG AAACTCAAAG AATTAGTAGA CCGAAAATTG
AGTTTAAGAG AAACAGTAAG GTTATTAGGG GTAGACCCTA TTACAGTTAA GAAGTATGCT
AAGAAACTTG GATTAACGAC TTACTGGGAA AAGCGGAGTG AGGCTGATGT TGTATATGAT
TATGAAAAGA GCAGTTATTC TTCAATGAAA TTGGATGATA AGGATTACTA CAGAAAAAGG
TGGAATGAAT TAAGAAAGCA ATATCCAGAG ATGGGAAAAA CGCAATTACG ACAGGTTGAT
AAGGCTTTAT TTGCCTGGCT TTATAGAAAT GACAGGGAAT GGCTAAACCA GAACTCACCT
GATAAAAAAG TGTCTAATAC TGTAAACAGA AGAGTTGATT GGAATCAAAG AGATAATGAG
ATATTGTCTC AGATAAAAGA AATAGTTGAT AAGATGCTGA ATTCGGACGA AAAGCCTGAA
AGGATTACTA TTAGTCTAAT TGGTAGTAAA TTAGGTATAA GAGGCTTGCT TGAAAAGCAT
TTAGATAAAC TTCCAAAGAC AAAAGCATAC CTGGATTCTG TTAAGGAGAC CAATCATGAC
TTCAGGTTAA GAAGGTTTCG CTGGGCAGTT AAGGAATTAG AGAAAGAAGG AGAAGAACTG
CAACTGTGGA AGATTATGAG GAAGGCTGGG ATAAGGAATA TATATCAAAT TTCAATCCAA
TTTGAAGGAA GTGGTAATTT TAAATAG
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| Protein sequence | MMTFFPVPYE DEVLYSVLAR YHVRSGNISY KATMRDLFGS TSVTAVMDLP SNIHNLVNNM
PLNSRYTEEY LIKNHTLFPF YSAFLPPERA EQVFQSMKGE NGGSIYTRTG IMASSIVLNQ
YFKFCPTCTE EDKLQYGELY WHRVHQISGV LVCPKHYVPL YNSLVPVRGY NKYQYKAASE
ENCVKPDINV IYADDVFEKL VRLAEDAQVL LNSDFEKRNI EWYKEQYLAK MMEMGFATVN
GKVYRKRLIK EFINYYGEEF LDMVQSSVDV DNDSNWLMDM IRKKNKTAHP IRHLLLSQFL
GISLQDLFNK KMEYKPFGDG PWPCLNAASD HYLKPVVSDL KVAYSTDSKC PVGTFSCTCG
FVYTRSGPDE SEDARYRFGR IKKFGQVWEE KLKELVDRKL SLRETVRLLG VDPITVKKYA
KKLGLTTYWE KRSEADVVYD YEKSSYSSMK LDDKDYYRKR WNELRKQYPE MGKTQLRQVD
KALFAWLYRN DREWLNQNSP DKKVSNTVNR RVDWNQRDNE ILSQIKEIVD KMLNSDEKPE
RITISLIGSK LGIRGLLEKH LDKLPKTKAY LDSVKETNHD FRLRRFRWAV KELEKEGEEL
QLWKIMRKAG IRNIYQISIQ FEGSGNFK
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