Gene Cthe_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1025 
Symbol 
ID4811319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1227211 
End bp1228548 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content37% 
IMG OID640106443 
Producthypothetical protein 
Protein accessionYP_001037450 
Protein GI125973540 
COG category[C] Energy production and conversion 
COG ID[COG1625] Fe-S oxidoreductase, related to NifB/MoaA family 
TIGRFAM ID[TIGR03279] putative FeS-containing Cyanobacterial-specific oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0603945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGGTT TTGGATTGAA ATACAGGCCT GTACCGATAA AAAGGGTTTT GCCCGGAAGT 
ATTGCACAAG AGTCTGACCT TCAGGAAGGG GACTTGATAT TATCCATTAA CGGCCAAAAA
ATAAGTGACA TATTTGATTA TAGATTTTTA ATTGCCGACG AGAATCTTGT CCTTGAAGTA
CAAAAGAAAA ACGGAGAAAT CTGGGAAATA GAGATTGAGA AGGACGAATA TGAGGATTTG
GGTATTGAGT TTGAAAATCT GATGATTGAT GATACCAAAA GCTGCAGAAA TAAATGCATT
TTTTGTTTTA TAGACCAGCT GCCCAAAGGA ATGAGAGAGA CTCTTTATTT TAAAGATGAT
GACTCCAGGC TTTCGTTTTT TATGGGAAAT TATGTTACAC TGACGAATAT GAGTTATGAT
GATATAGACA GGATAATAAA ATATAAAATG TCTCCCATTA ATGTTTCGGT TCATACGTCA
AACCCGGAAT TGAGGGTATA TATGTTGAGG AACAAGACGG CGGGAGATGT AATGGACAAA
ATTAAGAGGC TGATAGAAGG TGGAATAAAG GTTAATGCAC AGATAGTTCT GGTAAGGGGA
GTAAACGACG GAAAGGAACT CGACAGAACC CTAAAGGACC TTAGTGCACT TTATCCGGGC
TTAAACAGTA TTTCTGTGGT TCCGGTAGGT ATCACAAAGT ATCGTGAAGG ATTGTACGAG
TTAAAGCCTT TTGACATGGA ATCATCCAGG GAAGTTATAA AACAGGTTGA AGCCTGGCAG
ATGGAGCTTC TTTCAAAATA CGGTTCAAGA ATTGTTTTTA TTGCGGATGA GTTTTATATC
ATGGCAGGGC TTGAAATTCC CGATTATTGT GTTTACGAGG ATTTTCCCCA GATAGAAAAC
GGTGTAGGCC TTGTCGCGAT GCTTAAAAAA GAATTTGATG ATTACTTTGA AGAACTTGAG
CTCAAGCTCG AAAATAAAAG GGAAGTTTCC ATAGCAACCG GAGTTTCTTC TTATAAATAT
ATAAAGGAAA TGATAGATAT TCTTGAAAAT AAATATAAGA ATTTGTATGT TCATGTTTAT
AAAATAAAGA ATAATTTTTT TGGGGAAAAT GTTACTGTGA CCGGACTTCT TACAGGACAG
GACATTGAGA GGCAGCTGTC CGGAAAAAAT CTCGGCCGGG AACTTTTGCT TTCCGAATCC
ATGTTGAAGT CCGGCGAAAG AGTATTTCTT GACGATTATA CTGTTGAAAT GCTCGAAGAT
AAATTAAAAA CAAAGATAAC AATAGTTAGA AATAATGGAA AAGATTTCAT TGAAAAAGTT
CTGGGAATAG TTTTATAA
 
Protein sequence
MGGFGLKYRP VPIKRVLPGS IAQESDLQEG DLILSINGQK ISDIFDYRFL IADENLVLEV 
QKKNGEIWEI EIEKDEYEDL GIEFENLMID DTKSCRNKCI FCFIDQLPKG MRETLYFKDD
DSRLSFFMGN YVTLTNMSYD DIDRIIKYKM SPINVSVHTS NPELRVYMLR NKTAGDVMDK
IKRLIEGGIK VNAQIVLVRG VNDGKELDRT LKDLSALYPG LNSISVVPVG ITKYREGLYE
LKPFDMESSR EVIKQVEAWQ MELLSKYGSR IVFIADEFYI MAGLEIPDYC VYEDFPQIEN
GVGLVAMLKK EFDDYFEELE LKLENKREVS IATGVSSYKY IKEMIDILEN KYKNLYVHVY
KIKNNFFGEN VTVTGLLTGQ DIERQLSGKN LGRELLLSES MLKSGERVFL DDYTVEMLED
KLKTKITIVR NNGKDFIEKV LGIVL