| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0996 |
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| Symbol | polC |
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| ID | 4811290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1189887 |
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| End bp | 1194215 |
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| Gene Length | 4329 bp |
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| Protein Length | 1442 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106414 |
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| Product | DNA polymerase III PolC |
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| Protein accession | YP_001037421 |
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| Protein GI | 125973511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGTG TGTTGGTAAA GGAAAGAAAG CTCTCCGAAC TTTTTCCGGA AGTAATTAAT
AATGAAAATG AGAGGGAGCT TTTTGACACT GCAAGAATAC AAAATATAAA TGTTTATAAA
AAATCCAGGA AACTGGAGAT TTTTATTGTT TCTGACACAT TAATACCTGC AAAGACCCTC
GACAGTGTTG AACAGAGCTT TAAAAAACTG TTCGAACTGG AGCAGGTTCA TCTCAGGGTT
TCCTTCAATG TGGAGCTCTC GATAGAAGAG GCACTTGAAA AGTATTGGGA CAGCATACTT
TATATTGTGA AGAAGAATAT TGCGTTATGC AGGGGAATAT TAAGCGGATG CAAGTGGAAG
ATAGAGGATA AAAAATTATA TATTTACCTT AAGACAAAGG GAACAGAGAT TTTAAAGTGC
AAAAGTTGCG ATACTTTGAT TGAAAATATA ATAAAAGAAT GTTTTGGATT GGAAATAAAG
GTTGAATTTA AGGATTTTGA AATAGATGAG GATAAAATAA ACGAATATAT CGAATTTAAG
GAAAATGAGG AAGCCAAGAT TGTAACGGAT ACTGTTATTA AGAATAATGA AAAAACTCAA
AAAACTGAGA AAAGTGAAAA AACGTCCGGG GAATCAAAAA GCAATGTATC TTCGGCCGGT
GGGGAAAAGT CCGAGGTTAT TTTTGGCAAG AACTTTAATG ACAGCGTAAT GAACATGTCT
GAGGTGACTC AGGATTCTGG CAGGGTTGTT GTAAAGGGAG AAATAATAAG GACAGAAGCA
AGGGAATTGA AAAGCGGTAA ACTGCTGTAT GTATTTGATG TGACAGATTT TACCAATTCT
CTTACTGTTA AGATTTTTTT GGACAAGGAC AAGTCCGGAA GTGTTATAGA AAGACTTAAG
GAAAAGGCCA ACGTAAAAAT TCGCGGTGAA GCCCAATACG ATAAATTCTC AAGAGAACTG
TCGATATTGG CTTCAGATAT TGTTGAGGTT CCCGTGCAGG TGAGGACCGA TAATGCCGCC
GAAAAGAGAG TTGAGCTTCA CCTCCACACC CAGATGAGTG CAATGGACGG TGTTACGTCG
GTCGGAGAAC TGATAAAGCG TGCTGCCCAG TGGGGTCACA AGGCAATTGC CGTTACCGAC
CACGGGGTTG TACAGGCTTA TCCCGAGGCC TGTGAGGCGG CCAAAAAGAA TAAAATAAAG
GTTATTTACG GAATAGAGGC ATATCTTCTT GATGATTCCG TTCCCATTGT CTATCATGCC
AATGGACATC CCGTTGACGG GGAGTTTGTG GTATTTGATA TTGAAACGAC CGGCCTTTCG
GCTGATAAAG ATAAAATAAC GGAAATTGGT GCGGTAAAGA TTAAGGAAGG TAAAATTGTT
GATACCTTCA GCACATTTGT TAATCCTGAA ATTCCGATAC CGGAGTTTGT TGTCAAGTTG
ACAGGAATCA CTGACGATAT GGTGTCAGAC GCTCCAACCA TAGACAAGGT TTTGCCTGAA
TTTTTAGAGT TTGTGGGAAC TTCTCCTTTA GTTGCCCATA ATGCGGTTTT TGATACAGGA
TTTATCAGGC ATAATGCCCG GCTTATAAAC AGGAATGTGG ACAATCCTGT AATTGACACT
TTGGAACTTT CAAGGCAAAT GTTTCCGGAG CTTAAAAAAC ACAAACTGGA TGTGGTTGCA
AAGCATCTTG GTGTTTCATT GGAAAACCAT CACAGGGCTC TTGACGATGC AAAGGCCTGT
GGGGAGATCT TTATCAAATG CCTTGAGATA CTGGCTGAAA AGAATGTAAA AACAATTGAT
GACATACAAA ATGTTTTTGA GGGTTGTTGG AATTATCAGA AAGCAAATTC ATACCATGCC
ATTATACTTG TAAAAAATTA CGTAGGCCTT AGAAATCTGT ACAAGATTGT GTCCAAGACC
CATTTGGAGT ATTTTCACAA AAGGCCGAGA CTTCCAAGAA AGCTTTTAAT GATGCACAGA
GAAGGACTCA TTTTGGGAAG TGCGTGTGAA GCGGGAGAGC TTTACCGTGC GATTCTTGAA
AACAAAGATG AGGACGAAAT TTCAAGGATT GTAAAGTTTT ACGATTATCT TGAAATACAG
CCTTTGGGCA ACAACCGTTT CCTTGTCGAG AGCGGAAAGG TGAACAGTGA GGAAGACTTA
AAGAATATAA ACAGAAAAAT AGTAGCTTTG GGTGAGAAGT ACAACAAGCC GGTGGTCGCT
ACCTGCGATG TTCATTTCAT GGATCCGCAG GACGAAGTTT TCAGAAGAAT ACTTATGGCG
GGGCAAGGTT TTTCCGATGC GGACAACCAG GCACCGTTGT ATTTCAGGAC CACTGATGAA
ATGCTGGAAG AGTTTGAATA TCTGGGCAGG GAAAAATGCT ATGAAGTGGT TGTAACAAAT
ACAAATTTAA TTGCGGATAT GTGCGAGGAC ATACTTCCCA TACCGGAAGG AACTTTTCCT
CCTAAAATTG AAGGTGCGGA AGAAGAAATA AGGATGCTTG CCGAAAACAA GGCGAGAGAA
ATTTATGGCG ACCCTCTTCC TGAGATTGTG GAAAAGCGCA TGGAAAAGGA GCTTAACTCA
ATAATAAAAA ATGGCTTCTC CGTTATGTAT ATTATTGCGC AAAAACTTGT ATGGAAATCT
TTAAGTGACG GCTATCTTGT AGGGTCGAGG GGATCCGTCG GATCATCCTT TGTTGCCTAT
CTCATAGGCA TAACAGAGGT TAATTCCCTT CCGCCCCATT ACATATGCGA AAACTGCAAA
TACTCGGAGT TTATTGAAGA CGGAAGCTAC GGGTGTGGCT TTGACATGCC GGAAAAGGAA
TGTCCCAGGT GCGGGAAAAT TTTAAAAAAA GACGGTTACG ATATTCCCTT TGAAACTTTT
TTGGGATTTG AAGGAGATAA AGAGCCTGAT ATTGACCTTA ACTTTTCAGG AGAATACCAG
CCGATAGCTC ATAAATATAC CGAAGAACTT TTTGGTGTGG GACATGTCTA CAGAGCCGGT
ACAATTGGTA CAATTGCAGA AAAGACGGCC TATGGATTTG TAAAAAACTA TCTTGACGAA
AGAGGGATAG TTGCGACCAA TGCGGAAATT AACCGTCTTG TCAAAGGTTG TACCGGTGTA
AAGAGAACTA CCGGACAGCA CCCCGGAGGA GTTATGATTG TTCCCCAGGA CAGGGAAATT
TATGAATTTT GTCCGATACA GTATCCGGCG GACGACCCGG ACTCGGGTAC CATTACGACC
CACTTTGATT ACCACTCCAT CAGTGGAAGA CTTTTAAAGC TTGACATACT CGGACATGAT
GACCCTACGG TTATAAAGAT GCTGGAGGAT TTGACAGGGG TTAATGCCAG GACGATTCCC
ATAGGTGAAA AGAGAACAAT GGGTATATTC AGCAGCACCG AACCTTTGGG AATAAGGCCC
GAAGACATAA ACTGCCCGGT AGGAACTTTT GCGATTCCCG AATTTGGAAC CAAGTTTGTA
AGGCAGATGC TTGTAGATAC CAAACCAAAA ACTTTCTCCG AGCTTATAAG GATTTCGGGA
CTTTCCCACG GAACGGATGT CTGGCTCAAC AACGCCCAGG ATCTGGTAAG AAATAATATT
GCCTCATTGT CGGAAGTTAT ATGTACCAGA GACGATATAA TGTTAAATCT CATACACTAC
GGCCTTCCGA ACAAAACAGC GTTTAAAATT ATGGAAGATG TAAGAAAAGG AAAGGGACTT
AAAGAGGAAT ATGAGCAGAT AATGAGAGAA AAAAAAGTGC CGGACTGGTA CATTGAATCC
TGTAAAAAAA TAAAATACAT GTTCCCGAAA GCCCATGCGG CAGCATACGT TATGATGGCT
TTCAGAATTG CGTGGTTTAA GGTTTACTAT CCCGAAGCAT TTTATGCCAC ATATTTTACC
GTAAGGGCGG ATGAATTTGA CGCTTCCATG ATGTGTCACG GGAAGGAAAA GGTAAAAAAC
AAAATAAAGG AGTATGAGTT AAAAGGAAAC AATATGACCC AGAAAGAAAA GAACACTCTT
ACCATACTTG AGGTTGCAAA CGAAATGTAT GCAAGGGGTA TAAAGTTTTT GCCCATTGAC
ATCTATAAAT CCGATGCCGT TAAGTTTAAG ATTGAAAAAG ACGGACTCAG ACCGCCTTTG
AATGCTCTTC AGGGGCTTGG AGTTTCTGCT GCACACAGTA TAGCCCAAGC AAGAAACCAG
GGTGAGTTTT TATCTGTGGA CGACTTGAGA ATAAGGGCGA AGGTGAGCAA GACGGTTATA
GAAATTTTGC AGCAAAACGG GTGCCTGGAT GGTTTACCTG AAAGTAACCA GATAAGCTTG
TTTGGCTGA
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| Protein sequence | MQSVLVKERK LSELFPEVIN NENERELFDT ARIQNINVYK KSRKLEIFIV SDTLIPAKTL
DSVEQSFKKL FELEQVHLRV SFNVELSIEE ALEKYWDSIL YIVKKNIALC RGILSGCKWK
IEDKKLYIYL KTKGTEILKC KSCDTLIENI IKECFGLEIK VEFKDFEIDE DKINEYIEFK
ENEEAKIVTD TVIKNNEKTQ KTEKSEKTSG ESKSNVSSAG GEKSEVIFGK NFNDSVMNMS
EVTQDSGRVV VKGEIIRTEA RELKSGKLLY VFDVTDFTNS LTVKIFLDKD KSGSVIERLK
EKANVKIRGE AQYDKFSREL SILASDIVEV PVQVRTDNAA EKRVELHLHT QMSAMDGVTS
VGELIKRAAQ WGHKAIAVTD HGVVQAYPEA CEAAKKNKIK VIYGIEAYLL DDSVPIVYHA
NGHPVDGEFV VFDIETTGLS ADKDKITEIG AVKIKEGKIV DTFSTFVNPE IPIPEFVVKL
TGITDDMVSD APTIDKVLPE FLEFVGTSPL VAHNAVFDTG FIRHNARLIN RNVDNPVIDT
LELSRQMFPE LKKHKLDVVA KHLGVSLENH HRALDDAKAC GEIFIKCLEI LAEKNVKTID
DIQNVFEGCW NYQKANSYHA IILVKNYVGL RNLYKIVSKT HLEYFHKRPR LPRKLLMMHR
EGLILGSACE AGELYRAILE NKDEDEISRI VKFYDYLEIQ PLGNNRFLVE SGKVNSEEDL
KNINRKIVAL GEKYNKPVVA TCDVHFMDPQ DEVFRRILMA GQGFSDADNQ APLYFRTTDE
MLEEFEYLGR EKCYEVVVTN TNLIADMCED ILPIPEGTFP PKIEGAEEEI RMLAENKARE
IYGDPLPEIV EKRMEKELNS IIKNGFSVMY IIAQKLVWKS LSDGYLVGSR GSVGSSFVAY
LIGITEVNSL PPHYICENCK YSEFIEDGSY GCGFDMPEKE CPRCGKILKK DGYDIPFETF
LGFEGDKEPD IDLNFSGEYQ PIAHKYTEEL FGVGHVYRAG TIGTIAEKTA YGFVKNYLDE
RGIVATNAEI NRLVKGCTGV KRTTGQHPGG VMIVPQDREI YEFCPIQYPA DDPDSGTITT
HFDYHSISGR LLKLDILGHD DPTVIKMLED LTGVNARTIP IGEKRTMGIF SSTEPLGIRP
EDINCPVGTF AIPEFGTKFV RQMLVDTKPK TFSELIRISG LSHGTDVWLN NAQDLVRNNI
ASLSEVICTR DDIMLNLIHY GLPNKTAFKI MEDVRKGKGL KEEYEQIMRE KKVPDWYIES
CKKIKYMFPK AHAAAYVMMA FRIAWFKVYY PEAFYATYFT VRADEFDASM MCHGKEKVKN
KIKEYELKGN NMTQKEKNTL TILEVANEMY ARGIKFLPID IYKSDAVKFK IEKDGLRPPL
NALQGLGVSA AHSIAQARNQ GEFLSVDDLR IRAKVSKTVI EILQQNGCLD GLPESNQISL
FG
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