| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0927 |
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| Symbol | |
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| ID | 4811220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1112854 |
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| End bp | 1116426 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106346 |
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| Product | condensin subunit Smc |
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| Protein accession | YP_001037354 |
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| Protein GI | 125973444 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.177469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATCTGA AGAGACTTGA AATTCAAGGC TTTAAATCCT TTGCCGACAG GATACAGCTT
GAATTTAATT CCGGCATTAC TGCTGTGGTG GGACCGAACG GAAGCGGTAA AAGCAACATT
TCCGATGCGA TAAGGTGGGT ACTGGGAGAA CAAAGTGCCA AAACCTTAAG AGGCGGAAAG
ATGGAAGATG TAATATTTGC CGGTACCGAA CACAGAAAGC CCATGGGATT TGCGGAAGTT
TCCCTTACTT TTGACAATTC TGACGGCGTG CTTCCCATTG ATTTTAGTGA GGTTACGGTA
ACCAGGAGGG TGTATCGCTC CGGGGAAAGT GAGTATATGA TAAACAAAAC CCCGTGCCGT
CTTAAGGATA TATATGAGTT GTTCCTTGAT ACGGGAATTG GCAAAGACGG TTATTCCATA
ATCGGACAAG GAAGAGTTGA TGAAATCTTA AGCTCAAAGT CCGAAGACAG AAGGGCTATT
TTTGAAGAAG CCTCCGGGAT TATGAAGTAT AAGGTACGAA AGCAGGAAGC GGAAAAAAAG
CTTGAAATGA CAAGGCAGAA TCTGCTTAGA ATAAATGATA TTATTGCTGA GCTTGAAAAC
CAGCTGGAGC CTTTAAGAGA GCAGTCCGAG GTGGCAAAAA GGTACCTTGG CTTGAGAGAG
ACTCTAAAAG TACTGGAAGT AAATGTATAT ATAGAAAATA TCGCCAGATA CAAGGAAAAG
ATAAAGGAAT TGGAAGAAAA CTATGCGTCG GTAAAAGATA ACATAGACAG TGAAAATAAG
AGGCTGGAGG AAATTACAAG CCTCAATCAG ACGAACTTGA GCATTTTAAA AGATATGGAA
GGAAGGCTTG AAGCTGCAAA ACAAGAGTAT TATGCAATTG ACGGTAATCT TGAAAAATCC
AATTCCGAAA TCAGGCTAAA CCAGGAAAAA ATCAACAATC TGTTTTCAAA TATTGAACGC
CTTGACGGGG AAATAGCCGA GATTGATGAG AAAATCAAAA CTATTTTGGA GGAAGAAGCT
TCAAAGAATA GTAAAATCGT CTATCTTCAG GAGAGATACA ATGAGTATTC GGCAAAGCTT
GAAGAGGCTG AAAAAAAGCT TCAGGCCATT ATTGCCACAC TGAATGAGAA TGAGAGACAT
ATTGAAAACT TAAAGACAGA GATAATGGAA ATGCTTGACA TTCAGTCGGA CAAGAAGACG
CAGATCAACA ATATAAAAAA CCACATCGAA GGCATCAAAA AGAGACAGGC CAATATTGAC
AAAGAAGTAT ATCAGCTGAC TCTTGAAAAA GACAAGGAGT GCATGAAAAA AGAGGAGCTG
TCCGAGAGTA TCTACAAGAC AAACGAACTT ATAAAAAATA TAAAAGACTT GCTTCAGGAA
TTAACTGAAA AAAGAAAAGA CCTTGGTATA AAGCTCGAAG AGGAAAAGAA AAAGCAGAAT
AACGTCAGGT CTCAAATACA GATAATGACT TCGAGACAAA AGATGTTAAT AGACATGGAG
CGAAACCTGG AAGGCTATAA CCGGACTGTA AGGGTTATTT TACAGGCGTG CCGTGAGTCT
CATGAGTTTG GAAAGGGCAT TCATGGTGCG CTGGCTCAAC TGTTCACAGT GGACAAAAGG
TATGAGACAG CGATAGAAAT GGCGCTGGGT GGAGCTTTGC AGAATATTGT CACCACCAGT
GAGGAGGATG CCAAGAGGGT AATAGAATAT TTAAAGAAAA ACAATTTGGG AAGGGCAACT
TTTCTTCCCA TATCCTCTGT AAAAGGAAAA TATCTTGACG ACAGCATTTT AAACCAGTTA
AAAGATCATG AAGGCTTTGT CGGGGTTGCA TCCGACCTTA TTGAATATGA CGAGCAGTAC
AGGGGAATAA TTTTGAGCCT TCTGGGCAAG GTAGTGGTGG TAGAGAGCCT GGATGCCGGA
ATAAGGATGG CAAGAAAGTT TGGATACGGC TTTAGAATAG TATCCCTGGA CGGAGACATA
TTAAGCACCA CCGGTTCCAT ATCCGGAGGA AGCAAGGAAA AAAGAGAGTC GGGAATTTTG
AGCAGAAATC GGGAAATCTC CGAACTTGGG GAAAGCATTG CAAGGCTTAA GGAAGACGAT
GAAGCAATAG AAAAAAATGT TGAGGGATTA ATCAGAGAGC TTGAAGAGAT TACGGACAAA
ATATCCTTTG AGGAAAGAAG CCTTAAAGAC AATGAACTTG TAAAAATAAG AGACGAGAGC
CATTTGGCCC AGATTGAGGA AAATATCAAA AGAAGCCTTG CAAGAATTGA TATGCTAAAG
CAGGAGAAAG AGCAGCTCAT AAGACAGGAA AAGGATACTT GTCTGGAGCT TTCAAAATAC
GAAGATGAAC TGTCTGAAAT AGAAAGGGAT ATTGCAGAGA AAAAAGAGGT TGTGGCAAGG
TACCAGGAAA AGAACAAAGA AGAGCAGTCG GTAAGAGATG CATTGCACAA CGATATTACC
GACTACAGGA TTTCTGTAAA CTCCATTCTG GAGAGCATGG AAGGCGTAAA GGAAACATTG
GAGAGACTGG TAAATGAGAA AAACAGTCTT GTAAAGGCAA TGGAAAGAAA AAAAGCCGAG
AAAGCCAGAA ACGAGCAGGA GATTAAAGCT TTGCAGGAAA AAAATGAAGG TCTTGATAAA
CTAATTAAAA AGTATGAGGA GGAGAAATCT GGAAAGACTT TTGAAATAGA CAGGATTACG
GAGGAGAAAA AAATCCGGGA GGAAGAGTCT GCGGGTATTA TAGATCAGAT AACCGAAATA
AACAAAAATA TATTGCTGCT TCAGGAGGAA TACAGTAGAA TTGAGGTTAA GAAGGCAAAG
CTCGAGTCTG AGATGGAGTC TATTCAAAAC AGAATGTGGG ATGAGTATGA GTTGACTTAT
ACCAACGCAC TTGAGCTTAA AAAAGATATT GGAAGCATGG CGCAGGCGCA AAAAAGGATT
GCCGAAATAA GAAATGAGAT AAAGGAACTG GGGCCTGTCA ATGTGGCCGC CATTGACGAA
TATATAAAGA CAAAAGAGCG TTTTGAGTTT ATGTCGGCAC AGAAAAGCGA TATGGAACAG
GCTGAGAAAA AGCTTCAGAA AGTAATAAAT GAAATGATGA CCATAATGAA GCGCCAGTTT
ATGGAGAAAT TTAAACTTAT AAATGAAAAT TTTAACTTGG TGTTCAGAGA GTTGTTTGAC
GGCGGAAGGG CGGAATTGAT TCTGGTAGAC AAGGAGAATG TGCTTGAAAG CGGCATTGAG
ATAGAAGTAC AACCTCCGGG GAAGAAACTT CAGAATCTTA TGCTTCTTTC GGGAGGAGAA
AGAGCGTTTA CTGCAATTGC GCTGCTTTTT GCCATTCTAA GGCTTAATCC GACGCCCTTC
TGTGTGCTGG ATGAGATTGA AGCAGCTTTG GATGATGCAA ATGTGTACAA GTTTGCACAA
TATTTAAAGA AATATTCCAA TGTAACTCAG TTTGCGGTTA TTACTCACAG AAAGGGCACC
ATGGAAGCTG CCGATACGCT GTATGGTGTA ACAATGCAGG AGCATGGTGT TTCAAAAGTG
GTTTCCCTTA AAATGGGGGA AAAAGTGGGT TAA
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| Protein sequence | MHLKRLEIQG FKSFADRIQL EFNSGITAVV GPNGSGKSNI SDAIRWVLGE QSAKTLRGGK
MEDVIFAGTE HRKPMGFAEV SLTFDNSDGV LPIDFSEVTV TRRVYRSGES EYMINKTPCR
LKDIYELFLD TGIGKDGYSI IGQGRVDEIL SSKSEDRRAI FEEASGIMKY KVRKQEAEKK
LEMTRQNLLR INDIIAELEN QLEPLREQSE VAKRYLGLRE TLKVLEVNVY IENIARYKEK
IKELEENYAS VKDNIDSENK RLEEITSLNQ TNLSILKDME GRLEAAKQEY YAIDGNLEKS
NSEIRLNQEK INNLFSNIER LDGEIAEIDE KIKTILEEEA SKNSKIVYLQ ERYNEYSAKL
EEAEKKLQAI IATLNENERH IENLKTEIME MLDIQSDKKT QINNIKNHIE GIKKRQANID
KEVYQLTLEK DKECMKKEEL SESIYKTNEL IKNIKDLLQE LTEKRKDLGI KLEEEKKKQN
NVRSQIQIMT SRQKMLIDME RNLEGYNRTV RVILQACRES HEFGKGIHGA LAQLFTVDKR
YETAIEMALG GALQNIVTTS EEDAKRVIEY LKKNNLGRAT FLPISSVKGK YLDDSILNQL
KDHEGFVGVA SDLIEYDEQY RGIILSLLGK VVVVESLDAG IRMARKFGYG FRIVSLDGDI
LSTTGSISGG SKEKRESGIL SRNREISELG ESIARLKEDD EAIEKNVEGL IRELEEITDK
ISFEERSLKD NELVKIRDES HLAQIEENIK RSLARIDMLK QEKEQLIRQE KDTCLELSKY
EDELSEIERD IAEKKEVVAR YQEKNKEEQS VRDALHNDIT DYRISVNSIL ESMEGVKETL
ERLVNEKNSL VKAMERKKAE KARNEQEIKA LQEKNEGLDK LIKKYEEEKS GKTFEIDRIT
EEKKIREEES AGIIDQITEI NKNILLLQEE YSRIEVKKAK LESEMESIQN RMWDEYELTY
TNALELKKDI GSMAQAQKRI AEIRNEIKEL GPVNVAAIDE YIKTKERFEF MSAQKSDMEQ
AEKKLQKVIN EMMTIMKRQF MEKFKLINEN FNLVFRELFD GGRAELILVD KENVLESGIE
IEVQPPGKKL QNLMLLSGGE RAFTAIALLF AILRLNPTPF CVLDEIEAAL DDANVYKFAQ
YLKKYSNVTQ FAVITHRKGT MEAADTLYGV TMQEHGVSKV VSLKMGEKVG
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