| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0822 |
|---|
| Symbol | |
|---|
| ID | 4810440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 999688 |
|---|
| End bp | 1000413 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640106239 |
|---|
| Product | IstB-like ATP-binding protein |
|---|
| Protein accession | YP_001037250 |
|---|
| Protein GI | 125973340 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00034623 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACAT CTGATATTGC AGCATGTTGC AGAAGGCTTC GCCTCAGCCG GAACATAGTG
GAGATGTCAG GTAAAATACA GGCAGTCAGC CACCAGGAAT ACCTGCTTAA ACTTCTTCAA
TCAGAGATCC GGCATCGTGA AGAACTGAAG AAAGACAAAC TGCTGAAAAA AGCAGGTTTC
TATACCATAA AGACATTTGA AAGCTTCCGG TTTGATGAAG TAAAGCTGCC CAGTGGCGTT
ACTCCGGAAT ATCTTAAAGA GTGCGAGTTT ATCGAAAACA AACACAATAT CGTCATGTAC
GGCAATGTGG GCACAGGAAA GACGCATCTT TCAATTGCTT TAGGTGTAGA GGCCTGCAAG
AAGGGATTGG AGGTGAGATT TTTCAGGACA TCAGCGCTCG TGAACAGGCT GGCGGAACAA
AAGAAAGCCG GAACATTGTC AGGCTTCTTG AAGGACCTGA ATAAAGCAGA TCTTTTGATC
TGTGACGAAT GGGGCTACGT CCCCCTCGAC CGTATAGGAG CGCAGTTATT GTTTGAGGTC
ATATCCGAGT GTTATGAACG CAAATCGGTG ATCATCAATA CCAACATAGA ATTTTCAAGG
TGGGTGAACG TGTTCTATGA CGAGCAGATG ACAGGCGCCA TTATCGACCG GCTACTTCAT
CACTGTCACT TGCTACTGTT TCCCGGCCAG AGCAACAGGA TGCGCGAAGC TGTACTAAAC
ACATAA
|
|---|
| Protein sequence | MLTSDIAACC RRLRLSRNIV EMSGKIQAVS HQEYLLKLLQ SEIRHREELK KDKLLKKAGF
YTIKTFESFR FDEVKLPSGV TPEYLKECEF IENKHNIVMY GNVGTGKTHL SIALGVEACK
KGLEVRFFRT SALVNRLAEQ KKAGTLSGFL KDLNKADLLI CDEWGYVPLD RIGAQLLFEV
ISECYERKSV IINTNIEFSR WVNVFYDEQM TGAIIDRLLH HCHLLLFPGQ SNRMREAVLN
T
|
|---|
| |