Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0725 |
Symbol | |
ID | 4810343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 880415 |
End bp | 881911 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106142 |
Product | response regulator receiver modulated metal dependent phosphohydrolase |
Protein accession | YP_001037153 |
Protein GI | 125973243 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAGA GAATAATCGA AGTATCAACG GACTACAAAA TCCTTATTGT TGATGATGAA GAAGGCATAA TAAATTCAAT GAAAGTAATG CTTACAAGAA GTGGATATTT TTGCATGGGC ATTTCCAATC CTTTGGAGGC AATAGAAACT CTTAAAAAAG AGCATTTCGA TATGCTTATT TTGGATTACA TAATGTCACC TATCCATGGA GATGAGGTCG TTGCAAAGAT ACGAGAATTC AACAAGGACA TTTATATCCT TCTCTTAACG GGTCACAAAG ACTTGGCTCC TCCTCTTGAA ACCATCAAGG CTCTTGATAT CCAGGGATAT TGCGAAAAGG GAGACAAGTT TGACCAGCTT CTTCTTTTAA TTGAATCAGG AATAAAATCA ATATCTCAAA TGCGCACCAT AAGGCAGTTT AAAGACGGTT TAAACAGAAT ACTTCAGGCT GTTCCAAAAA TTTATCAACT CCAGCCGATA GGAGTTATTT TGGAAGAAAT ATTGCAGGGC CTGATGCCTC TTGTAAACAG CAAAGATGCT TTCATTCTGG TAGATGATTG CAACAGCGGT GAAGGGAAAA TCATCTTTAA GGGAGTCGGT GAATACGACA TCAAGGCAGA ATCGCTGGTT ACCATGCTGA GCCCTGAACT TATGGAAAAT ATAGGTCGTG CAAGGGACAG CAAGAAAGTT CTGCTCTTAG ACCATGGAAT AATACTTCCT CTTACGAACG AGCAAAACAA ATCCATTGGA GTAATTTACA TTGAAAGCAG CAATTTGGGT GACGGAATAA AACTCCTTGA AATATATTCC ACACAGGCGG CTTCATCTAT TAATAATGCA TTTTTGCATT CATTAATCAA CATGAAGAAA GAAGAGCTTG ACAGAACCTA TCAGGAGCTT AGGAAAAGAT ATATTGACAC AATAGAAGCT TTGCGTCTGA CAGTTGATGC AAAGGATATA TATACAAGGG GGCATTCGGA CCGTGTCGCA TACTATGCGG TAAAGCTGGG TGAAGCCTTC GGACTTCCGG AAGATCAGTT GGAGCTTCTC AAAGTGGGCG GTATTTTCCA TGACATAGGA AAAATCGGCA CGGCCGATGA TATTCTTTTC AAAACCGACA AGCTGAGCTA CGATGAATAT GAAGAAATTA AAAAGCATCC GTTAAAAGGT GCGTACATAC TTTCGGCCAT TTCAATGTTC AAGGATGTTG TTCCGCTGGT AAAATATCAT CATGAGAGAA TTGACGGTAA AGGTTATCCT GAGGGATTGA AAGGGGACGA GATTCCGTTT TTGGCAAGAA TATTAACGGT TGCCGATGCT TTTGACGCTA TGATGTCGGA CAGAAAATAC AGGTCAAAAC TTAGCCTCGA AGAAACCAAG GAGCAGTTTA GACTGTATTC CGGTACCCAG TTTGACCCCC AGGTGGTTGA AAAGCTTTTT GAGATTCTTG AAAACTATGA TTTGATGCTT GAAGAACTGT CAAAAACTTT TACCTAG
|
Protein sequence | MRKRIIEVST DYKILIVDDE EGIINSMKVM LTRSGYFCMG ISNPLEAIET LKKEHFDMLI LDYIMSPIHG DEVVAKIREF NKDIYILLLT GHKDLAPPLE TIKALDIQGY CEKGDKFDQL LLLIESGIKS ISQMRTIRQF KDGLNRILQA VPKIYQLQPI GVILEEILQG LMPLVNSKDA FILVDDCNSG EGKIIFKGVG EYDIKAESLV TMLSPELMEN IGRARDSKKV LLLDHGIILP LTNEQNKSIG VIYIESSNLG DGIKLLEIYS TQAASSINNA FLHSLINMKK EELDRTYQEL RKRYIDTIEA LRLTVDAKDI YTRGHSDRVA YYAVKLGEAF GLPEDQLELL KVGGIFHDIG KIGTADDILF KTDKLSYDEY EEIKKHPLKG AYILSAISMF KDVVPLVKYH HERIDGKGYP EGLKGDEIPF LARILTVADA FDAMMSDRKY RSKLSLEETK EQFRLYSGTQ FDPQVVEKLF EILENYDLML EELSKTFT
|
| |