Gene Cthe_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0687 
Symbol 
ID4810305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp846669 
End bp847463 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content38% 
IMG OID640106104 
Productcondensin subunit ScpA 
Protein accessionYP_001037115 
Protein GI125973205 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAGTG TGTTGTCAAA AGCATGCACT ATAAAAATAC AAAACTTTGA AGGACCGTTT 
GACCTGCTGT TTCACCTTAT CGAAAAGAAT CAGATAAATA TCTATGACAT ACCTATACAC
GAAATAACGG ACCAATACAT GGATTACCTT TTTGCAATGC AGGAGCTTGA TTTGGAGATA
GCCAGTGAAT TTCTGGTAAT GGCAGCAACA CTTCTTCACA TAAAATCGAA GCTCCTACTT
CCAAGTCCTA AACGGGAAAA AGAGGAGGAC GAGCCTGACC CCAGGGAAGA GCTGGTTTTA
AAGCTTATTG AATACAAAAA ATACAAGAGA TTTACTGAAA TTTTGAAAAC AAGAGAAAAA
GAATGCGAGA AATATTTTTA CAGAGGTCCT GAGGATATTG ACATCAAATG TGAGGATGAA
CCTTTGGAAT TGTCTTATGA TGAGCTAAAG AGGGTCTACG TTGAGTTGAT AGAAAGAAAT
GAAAGAAAAA TGAACAAAAA TACCGGAAAA ATGACCCAGA TAGTGCAGCA TGAAAAAGTC
ACACTGCGCA GTAAAATCAG AGATATCATC AGGACTCTTC TTAAAAAGCC GATTTTCAAG
TTTTCGGAGC TTTTTTCTCC AAAAACCAGA TCCAGACTTG AAATTGTTAC AGGCTTTCTC
GCGATACTTG AGCTGGCAAA ACTGAAAAAA ATAACCCTGA TACAGCCAAA ACCGTTTGCG
GATATTACTG TCTGCAAATG CGAAGATACC AATCTTGAGG ATATTGACGA TGAAAATGTG
GCAGCGGAAA ACTGA
 
Protein sequence
MESVLSKACT IKIQNFEGPF DLLFHLIEKN QINIYDIPIH EITDQYMDYL FAMQELDLEI 
ASEFLVMAAT LLHIKSKLLL PSPKREKEED EPDPREELVL KLIEYKKYKR FTEILKTREK
ECEKYFYRGP EDIDIKCEDE PLELSYDELK RVYVELIERN ERKMNKNTGK MTQIVQHEKV
TLRSKIRDII RTLLKKPIFK FSELFSPKTR SRLEIVTGFL AILELAKLKK ITLIQPKPFA
DITVCKCEDT NLEDIDDENV AAEN