Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0687 |
Symbol | |
ID | 4810305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 846669 |
End bp | 847463 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106104 |
Product | condensin subunit ScpA |
Protein accession | YP_001037115 |
Protein GI | 125973205 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAAAGTG TGTTGTCAAA AGCATGCACT ATAAAAATAC AAAACTTTGA AGGACCGTTT GACCTGCTGT TTCACCTTAT CGAAAAGAAT CAGATAAATA TCTATGACAT ACCTATACAC GAAATAACGG ACCAATACAT GGATTACCTT TTTGCAATGC AGGAGCTTGA TTTGGAGATA GCCAGTGAAT TTCTGGTAAT GGCAGCAACA CTTCTTCACA TAAAATCGAA GCTCCTACTT CCAAGTCCTA AACGGGAAAA AGAGGAGGAC GAGCCTGACC CCAGGGAAGA GCTGGTTTTA AAGCTTATTG AATACAAAAA ATACAAGAGA TTTACTGAAA TTTTGAAAAC AAGAGAAAAA GAATGCGAGA AATATTTTTA CAGAGGTCCT GAGGATATTG ACATCAAATG TGAGGATGAA CCTTTGGAAT TGTCTTATGA TGAGCTAAAG AGGGTCTACG TTGAGTTGAT AGAAAGAAAT GAAAGAAAAA TGAACAAAAA TACCGGAAAA ATGACCCAGA TAGTGCAGCA TGAAAAAGTC ACACTGCGCA GTAAAATCAG AGATATCATC AGGACTCTTC TTAAAAAGCC GATTTTCAAG TTTTCGGAGC TTTTTTCTCC AAAAACCAGA TCCAGACTTG AAATTGTTAC AGGCTTTCTC GCGATACTTG AGCTGGCAAA ACTGAAAAAA ATAACCCTGA TACAGCCAAA ACCGTTTGCG GATATTACTG TCTGCAAATG CGAAGATACC AATCTTGAGG ATATTGACGA TGAAAATGTG GCAGCGGAAA ACTGA
|
Protein sequence | MESVLSKACT IKIQNFEGPF DLLFHLIEKN QINIYDIPIH EITDQYMDYL FAMQELDLEI ASEFLVMAAT LLHIKSKLLL PSPKREKEED EPDPREELVL KLIEYKKYKR FTEILKTREK ECEKYFYRGP EDIDIKCEDE PLELSYDELK RVYVELIERN ERKMNKNTGK MTQIVQHEKV TLRSKIRDII RTLLKKPIFK FSELFSPKTR SRLEIVTGFL AILELAKLKK ITLIQPKPFA DITVCKCEDT NLEDIDDENV AAEN
|
| |