Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0664 |
Symbol | |
ID | 4810281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 818815 |
End bp | 819627 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640106080 |
Product | hypothetical protein |
Protein accession | YP_001037092 |
Protein GI | 125973182 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGCG ATGATGTGAC GTCATCAACT GAGCCTCAGA AGTGCAATAA AATTAACAAG GCAAACAGAA TATACGGAAT AATAATATAT TTTTTATCTG TTGCTATAAT CAGTCTGATA GTCAACAACA TTATAATATA CAATTGGTAC AATGATACAA AAAAACGGTT TAAGGATACT TTTCTCAGAG TCCAAACCAT GTCTGAGGAA AATATGAATT TGGAAACCTT AAATGAAACT TTGAAAAATG AGTATGCTTT GCTGAAGGAA GACTATGACA GGCTATTGAA TGAAAATGAA AGTATAAAAA AGGAGTTTGA AGAACTTAAG AAAAGAAACG CTGATATTGA GAGAATAAAC AAAGAATTGG TAGAAGACAA TATAGAACTT CAAAATACAT TAAAAATGGC TGCAGCAGCA GGAATAAAGC CTCAAAACTA TACAGAATTT AAAGGACTGA GCTCAAGAAG CTCAATTGAC AGAGGTGAAT ACATCGGAAA ATTTTTAGGA ACGGCGTATA CCCCGTCTAA AGAAGAATGC GGCAATGATA ACGGAATAAC CAATTCCGGC AAACCTATAA TTCCCGGAAT ATCTGTTGCA GTTGACAAAA ATTACTGGCC TTTTGGAACT GTATTTTATA TTAAAGGATT GGGGTATGCG GTGGCCATGG ATACAGGCAG TGCAATCAAA GGTAAATATA GATTCGACTT TGCAGTATTC GACAAAAACT TCGCAAACAA ATTGGGAGCA AATTACTGGG ATGTCTATCT GGTAAAAATG GGCAACGGGA AAGTTGAAGA CATCTCTCTA TAA
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Protein sequence | MLSDDVTSST EPQKCNKINK ANRIYGIIIY FLSVAIISLI VNNIIIYNWY NDTKKRFKDT FLRVQTMSEE NMNLETLNET LKNEYALLKE DYDRLLNENE SIKKEFEELK KRNADIERIN KELVEDNIEL QNTLKMAAAA GIKPQNYTEF KGLSSRSSID RGEYIGKFLG TAYTPSKEEC GNDNGITNSG KPIIPGISVA VDKNYWPFGT VFYIKGLGYA VAMDTGSAIK GKYRFDFAVF DKNFANKLGA NYWDVYLVKM GNGKVEDISL
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