Gene Cthe_0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0664 
Symbol 
ID4810281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp818815 
End bp819627 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content35% 
IMG OID640106080 
Producthypothetical protein 
Protein accessionYP_001037092 
Protein GI125973182 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGCG ATGATGTGAC GTCATCAACT GAGCCTCAGA AGTGCAATAA AATTAACAAG 
GCAAACAGAA TATACGGAAT AATAATATAT TTTTTATCTG TTGCTATAAT CAGTCTGATA
GTCAACAACA TTATAATATA CAATTGGTAC AATGATACAA AAAAACGGTT TAAGGATACT
TTTCTCAGAG TCCAAACCAT GTCTGAGGAA AATATGAATT TGGAAACCTT AAATGAAACT
TTGAAAAATG AGTATGCTTT GCTGAAGGAA GACTATGACA GGCTATTGAA TGAAAATGAA
AGTATAAAAA AGGAGTTTGA AGAACTTAAG AAAAGAAACG CTGATATTGA GAGAATAAAC
AAAGAATTGG TAGAAGACAA TATAGAACTT CAAAATACAT TAAAAATGGC TGCAGCAGCA
GGAATAAAGC CTCAAAACTA TACAGAATTT AAAGGACTGA GCTCAAGAAG CTCAATTGAC
AGAGGTGAAT ACATCGGAAA ATTTTTAGGA ACGGCGTATA CCCCGTCTAA AGAAGAATGC
GGCAATGATA ACGGAATAAC CAATTCCGGC AAACCTATAA TTCCCGGAAT ATCTGTTGCA
GTTGACAAAA ATTACTGGCC TTTTGGAACT GTATTTTATA TTAAAGGATT GGGGTATGCG
GTGGCCATGG ATACAGGCAG TGCAATCAAA GGTAAATATA GATTCGACTT TGCAGTATTC
GACAAAAACT TCGCAAACAA ATTGGGAGCA AATTACTGGG ATGTCTATCT GGTAAAAATG
GGCAACGGGA AAGTTGAAGA CATCTCTCTA TAA
 
Protein sequence
MLSDDVTSST EPQKCNKINK ANRIYGIIIY FLSVAIISLI VNNIIIYNWY NDTKKRFKDT 
FLRVQTMSEE NMNLETLNET LKNEYALLKE DYDRLLNENE SIKKEFEELK KRNADIERIN
KELVEDNIEL QNTLKMAAAA GIKPQNYTEF KGLSSRSSID RGEYIGKFLG TAYTPSKEEC
GNDNGITNSG KPIIPGISVA VDKNYWPFGT VFYIKGLGYA VAMDTGSAIK GKYRFDFAVF
DKNFANKLGA NYWDVYLVKM GNGKVEDISL