| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0629 |
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| Symbol | |
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| ID | 4808158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 776050 |
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| End bp | 777495 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640106043 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001037057 |
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| Protein GI | 125973147 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATCGA GAAGTACTGT AAGTGAACTT CAAAAGAAAG CAAAGTATAT ACATAGAACC
AATACTTCAG GAAGCAAGCT CACATCCATG ACTTTTGAAG AATGTCTAAA GCAGTGTCAG
CAGTATATAA GCAATGTGGC GACAAATTAT TACAGAAGAA TTGAAGACCC GGCCAAAAAG
AGGGAAATGA CGGAAAGGTA TATAATTGAC TATGTTGAAA CACAGAAGCC TGAAGTGGAA
GGATTTGAGG AACTTTCGGC CTTAAGAAAT GCCCTTATTG ATGAGATTAC CCAATACGGT
CCGATAACAG ATGCGATGGA AGACCCTCTA ATAGACGAAA TCAGAGCCAA TGGTCCGCAG
CAGATATTTG TAGAGAAAAA GGGTAGAACC GAGATTTGGG ACAAATGCTT TACCGACAGG
GAGCATATGG AAAGAATAAT TGCAAAGCTT ATTGGAGTAT CCAAGGTGAG GCTTACCCCA
AGAACGCCAA TGGTAAATGC CCGTACCATA GAAGGCTACA GGGTCAATGC CACCCATGCG
GATATTTCAC CTTACGGCAA TCCGGCGTTT GTGGTAAGAA AGTTTAAAAA GTACACTCTG
ACTCCGGAAG AGATGATAAA GGAAAAATCA TTTTCAGTTA ATATGTACAA GCTTCTTTCG
CTTATACCCA AGGCCAATCT TTCCTGGATG ACGGCCGGGC CTACCGGCAG CGGAAAGACC
ACTTTGAATG AAGTTTTGAT AAAGCATATT GATCCGCTGT GTCGTATTAT AACAATTGAA
AACCCTGCAG AGTACAGGCT GCTAAGGTAC AAAAACGATG ACCCCAATGA AAGGGTTATA
AATGACGTGC TTCAGTATGA GTGTGTTCCT GATGATGACG ACAGCAGTCC GGCAACAATG
GAAAATTTGT TGATAAATGC CATGAGACAG TCTCCTCACT GGATAGGTCC CGGTGAGCTT
CGTTCTCCGG GAGAGTTTGA GACTGCCCTG CGCGCTGCGC AAACCGGTCA CTATTTCTTT
ACAACCCTGC ATGCGGAAGG AGACCAGGAA GCAATTTACA GGTTCCTTAC TGCTTACCTT
ATAAAATCAA AAGAACCTGC GGAACTGGCC CTGAGAAATA TATGTACCGC CGTTAAATTT
GTCATATTCC AGGAAAAGCT GGCCGACGGA ACCCGTAAAG TTACATCAAT TTCTGAAGTC
AGAGGTTCTG AAGGCTTAAA GCCTATTATT AACCAGATAT ACAAATTTAT TCCTGAGGAT
GTTGATGAGG ATCCTGTTAC AGGGCAAATC AGAGCAATAG TAGGCAAGCA CAAGAGAGTA
GGCCGTATAT CGGATGAGCT TGTTGACAGA ATGATGAAAG CAGGAATAAA AAAGAGTAAG
TTTGAATTCC TCACGCGTCC GGTTGACCCC GATGAAGAGG AGGTTTACGA TATAGATGCT
CTTTAA
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| Protein sequence | MLSRSTVSEL QKKAKYIHRT NTSGSKLTSM TFEECLKQCQ QYISNVATNY YRRIEDPAKK
REMTERYIID YVETQKPEVE GFEELSALRN ALIDEITQYG PITDAMEDPL IDEIRANGPQ
QIFVEKKGRT EIWDKCFTDR EHMERIIAKL IGVSKVRLTP RTPMVNARTI EGYRVNATHA
DISPYGNPAF VVRKFKKYTL TPEEMIKEKS FSVNMYKLLS LIPKANLSWM TAGPTGSGKT
TLNEVLIKHI DPLCRIITIE NPAEYRLLRY KNDDPNERVI NDVLQYECVP DDDDSSPATM
ENLLINAMRQ SPHWIGPGEL RSPGEFETAL RAAQTGHYFF TTLHAEGDQE AIYRFLTAYL
IKSKEPAELA LRNICTAVKF VIFQEKLADG TRKVTSISEV RGSEGLKPII NQIYKFIPED
VDEDPVTGQI RAIVGKHKRV GRISDELVDR MMKAGIKKSK FEFLTRPVDP DEEEVYDIDA
L
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