| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0582 |
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| Symbol | |
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| ID | 4808257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 712662 |
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| End bp | 714425 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640105996 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001037011 |
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| Protein GI | 125973101 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAAA ATCTGCACAT TAATGAGAAT CTTCCGGAAG ACATATTGGA AAGCATCGTT
ATTAGCTCAA CGGAATATGC CATTATCGCT ACTGACATCC ACAACAGGAT AATTATCTGG
AACAAGGGTG CTGAACTCAT TTACGGCTAC TCAAAGGAAG AAATGCTGGG AAAGCAGTTT
CCTCCCGACC TTCACAGAAA AGGTTTGCCA AACAATGAAT TTCTTTTCGT ACCCAACAAT
GAAACAAAAT CGCGCCTGAT AGACCAAACA ATGTATGCCA AAAGAAAAGA CGGAACTTTT
ATCCCCATTT CCATTACCTC AACCCCCAGA GTCAACAAAA ACAGCAAAAC ACTGGGCTTA
TTGATTCTTA CCAGAGATAT TACAAGATAC AAGCTTTTGG ACCAATTCAA CAGTGTACTG
ATTGAAATCA CACATCTTAT AAATTCATCA TCCTCCATAG ACCAGATGTG TTCCGAGGTA
TGCAATGCCA TAAGCAGCTT CCTCGGCTTG CCGGCGGTAT TTATTTGTCT TTTTGACCGT
CCTGGCAACT TTTTTTACAT AAATGCAATG ACTGGTTTGT GCAAAAACTG CACCGGACAC
ACCTGCGGCT ACCATACCTG CGCCAAAGAT GTGGCGGAAA ACATAAAAGG CTGCTTCAAA
ACTTACACAC AGCTTACAAT AAACCACTCT CCCCTTTCGG AACATGCCAT CTATGAATAC
ATGGAAGCAC ATTTACCCGG CAGAGGTGAA AACTTCATAA TTCACATTCC TCTGATATCG
GACGTTTCAA TCATGGGAAT ACTTCACATT GTTGTTTCTG AACCTCAGAA AACCTTTCTT
CTCAAAGAAA GCCAAATCTT AAGCCTTGTT GCCAATGAAA TAACAACAGG GATTCAGCGA
AAACGCTTGA TAGAAGAAAT AAAGGAATAT GCCGACAATC TTGAAAAAAT GGTAAAGGAG
AGGACCCGTG AGCTGCGCGA AAAAGACGCA CAGCTGGTAC AGTCGGAAAA ACTTGCCACT
CTGGGGGAAA TGGCCACCGG TATAGCTCAT GAAATAAATC AGCCTTTGGG AGGTATAAGT
CTGATTACCC AGGGGCTTAT TCTGGCAAAA AAGCGGAATA AACTGACCGA TGAAATGTTG
CTCGAAAAGC TCAACGCCAT TATAGAGCAG GTGGATCGTA TTGATAAAAT AATCGGACAC
CTTCGCACCT TTGCAAGGCA ATCCGACCAA ACTAAAACAC CGGTAAACAT TAAAATGCCT
CTCACGGACG TGTTCAAACT TATTGGCGAA CAGCTGAAAA GACAACAAAT CAGTGTTGAT
ATGGACATCG AAGAAAACCT TCCATATGTT CTTGCCGATC ATAACAGACT GGAACAGGTT
TTTTTAAATC TTATTATAAA TGCAAAAGAT GCCTTGAATG AACGTGAAAA AGTCCAACAA
CGCCTGGTAT CCGAAAATGA CGCTGACGGA CAAATTGTCC CCCCGGATAA AAAAATAACT
ATAAAAGCCT TTTCGGATAA TAAACATGTC ATTATTGAAA TTACTGACAA CGGAATTGGT
ATTTCCAAAT CCATTATCAA TAAAATCTTT GAGCCTTTCT TTACTACAAA GGAAGTTGGA
AAAGGTACCG GCATCGGGTT GTCAATAAGT TACGGAATTG TCAAAGAATT TAACGGTACA
ATAGAAGTAG AATCCGAAGA AATGAAAGGC AGCAAATTTA TAATAAAATT CCCCATATAT
AAAGAAAACA GCATGCAAAA ATAA
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| Protein sequence | MRKNLHINEN LPEDILESIV ISSTEYAIIA TDIHNRIIIW NKGAELIYGY SKEEMLGKQF
PPDLHRKGLP NNEFLFVPNN ETKSRLIDQT MYAKRKDGTF IPISITSTPR VNKNSKTLGL
LILTRDITRY KLLDQFNSVL IEITHLINSS SSIDQMCSEV CNAISSFLGL PAVFICLFDR
PGNFFYINAM TGLCKNCTGH TCGYHTCAKD VAENIKGCFK TYTQLTINHS PLSEHAIYEY
MEAHLPGRGE NFIIHIPLIS DVSIMGILHI VVSEPQKTFL LKESQILSLV ANEITTGIQR
KRLIEEIKEY ADNLEKMVKE RTRELREKDA QLVQSEKLAT LGEMATGIAH EINQPLGGIS
LITQGLILAK KRNKLTDEML LEKLNAIIEQ VDRIDKIIGH LRTFARQSDQ TKTPVNIKMP
LTDVFKLIGE QLKRQQISVD MDIEENLPYV LADHNRLEQV FLNLIINAKD ALNEREKVQQ
RLVSENDADG QIVPPDKKIT IKAFSDNKHV IIEITDNGIG ISKSIINKIF EPFFTTKEVG
KGTGIGLSIS YGIVKEFNGT IEVESEEMKG SKFIIKFPIY KENSMQK
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