| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0553 |
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| Symbol | |
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| ID | 4808302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 675495 |
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| End bp | 676394 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640105967 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001036982 |
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| Protein GI | 125973072 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.141642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAA ACTTTGAATT GTACAAAATT TTTTATCATA CGGCAAAAGC TAAAAGCTTT
TCAGCTGCCG CTGACACGCT TCATGTTTCA CAGTCGGCGG TAAGCCAGTC TATAAAAAGT
CTTGAAGAAA AACTGGGTTC CAAGCTCTTT TTTCGAAAAA ACCGGGAAAT AAAGCTTACC
GCGGAAGGAG AAATACTGTT TAAACACATT GAGCAGGCTT ACAATTTCAT AAAAACAGCC
GAACATAAAA TATATCAGAC CCAAAATATG GAAAGAGGTG AGATAAGAAT CGGTGCCAGC
GACACAGTCT GCAAATATTT TTTAATTCCT TATATAGAAA AATTCATAAA AAACTATCCT
AATATTAAAA TACAGGTGAT AAACAGAACT TCGTCGCAAA TTGAAGAGAT ACTGAAAAAA
GGGCTTATTG ACTTTGGCAT AGTAACTCTC CCGGTGCAGG ACAGTAATAA AATCCACCAT
GAAGAATTTT TAACCGTAAA AGATATATTC GTGGCCTCCG ACAAGTTCAG CATGCTTAAA
AACCAGGAAA CCGACATAAA AACCCTTGCC TCCTACCCTC TTCTCATGCT TGACCGTGGC
ACTTCGACAA GGCGGAATAT TGACTCTTAT CTTTCCTCCA AAGGAATTGG CATTGTACCG
GAGATAGAAT TGGAAAGCAT TGACCTTCTT GTAGAGTTTG CAAAAATTGG ACTAGGTATT
GCTCTGGTTC TGAAAGAAAG CGTCGCCGAC GAACTAAAAA AAGGGACTCT ATTTGAAGTA
AAGCTTAAAG AAGACATTAC CCTTAGAAAA CTTGGAATCA TCACCATGAA AAATGTACCG
CTCTCCAGAG CTTCTTCCGA ATTCATCAAG CTCCTTCGCA CACATTCAAA TCCAATGTAA
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| Protein sequence | MDINFELYKI FYHTAKAKSF SAAADTLHVS QSAVSQSIKS LEEKLGSKLF FRKNREIKLT
AEGEILFKHI EQAYNFIKTA EHKIYQTQNM ERGEIRIGAS DTVCKYFLIP YIEKFIKNYP
NIKIQVINRT SSQIEEILKK GLIDFGIVTL PVQDSNKIHH EEFLTVKDIF VASDKFSMLK
NQETDIKTLA SYPLLMLDRG TSTRRNIDSY LSSKGIGIVP EIELESIDLL VEFAKIGLGI
ALVLKESVAD ELKKGTLFEV KLKEDITLRK LGIITMKNVP LSRASSEFIK LLRTHSNPM
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