| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0552 |
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| Symbol | |
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| ID | 4808301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 674791 |
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| End bp | 675342 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105966 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001036981 |
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| Protein GI | 125973071 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0032692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAGC AAATCAAACA AATCAGTAAA AGAATTAAGG AACTTAGGGA AATCTCCGGT
ATTTCCGCGG AAACGCTGGC AAGGGAACTG GGCATTGACA GCAAAACCTA TACAGAATAC
GAAAGCGGCA ACGTAGACAT ACCGGTCAGC CTGTTGTTCA AAATTGCCGG CAGATTTAAC
GTTGAGCTTT CCGAAATCCT TACAGGCGAA GCTCCAAAGC TCCATACATA TTGTGTTGTC
AGAAAAGACA AGGGTGTAAG CGTGGAAAGA AGAAAGGACT ATAAGTATCA AAGCCTTGCA
TACAATTTCG CAAACAAAAA AATAGAACCA TTCCTTGTCA CCGTTGAACC CGACTCAAAT
TCCGAAGTGA ACTACAATTC CCACCCGGGT CAGGAATTCA ACTACGTTAT CGAAGGTGTT
TTAAAGGTAA TTATCAATGG TCATGAAATC ATACTTAATG AAGGTGACTC CCTGTTCTTC
GACTCGGGCG CAAAACACGG CATGAAGGCT ATGAATGGCA AGCCTGCGAA ATTTCTGGCT
ATAATTTTAT AA
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| Protein sequence | MSEQIKQISK RIKELREISG ISAETLAREL GIDSKTYTEY ESGNVDIPVS LLFKIAGRFN
VELSEILTGE APKLHTYCVV RKDKGVSVER RKDYKYQSLA YNFANKKIEP FLVTVEPDSN
SEVNYNSHPG QEFNYVIEGV LKVIINGHEI ILNEGDSLFF DSGAKHGMKA MNGKPAKFLA
IIL
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