| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0472 |
|---|
| Symbol | |
|---|
| ID | 4808325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 587106 |
|---|
| End bp | 588077 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640105886 |
|---|
| Product | flagellar hook capping protein |
|---|
| Protein accession | YP_001036903 |
|---|
| Protein GI | 125972993 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAG ATGCTGTAGG CCGTCAAAAG ACCATTCAGG AAATCATTGA CAGTACCACA
AACAAGTCGA CTCAAAGAAA TACCGGGGAA CTGGGAAAAG ATGAGTTTTT AAACCTTCTC
ATTACACAGC TTCAATATCA GGACCCTCTA AATCCTGTGG ATGACAAGGA ATTTATCAGC
CAGATGGCAC AGTTCAGCGC CCTGGAACAA ATGCAGAACC TCAATAAAAG CTTTTCAGCC
ACAAAGGCCT TTGGCATGAT AGGAAAATAT ATTACCGGTA CTACCAGTAA CGGCAGTGAT
TCAGGAGCCG GTTTTGTAGA GGGTATTGTA CGCAGTGTGA AAATGGAAAA CGGAAAAATT
CTTTTGGAAG TCAATGGCTT GGATGTTCCG GTGGATAATG TGCTCAGTGT TTCAGAAGAA
AGCAATTATT ATTACAAGTA CAATAGTTCA AATATATCCC AATACACCGG AATTATCGGC
TATGAAGTAA GCGGAAGTGT ATATGATCCT TCCACCGGGG ACATTGTCGG CGTGAGTGGA
ATTGTAAGGG AAATCCAGAA AGGTATTTAT GAAGATTATG CTGTAATGGA CGGTGTAGAG
GTAATAATTT CCGGAATAGA CACTGAATTT AATTCGGCAG ATCCGAACTT TAGAAAGGAT
TACCTTACAG AAAACGTAGG CCAGGGAGTT TCTCTTATAA TCACCGACGC ATACGGTTAT
GGATTTAAGG TTCCTGTTAC AGGGGTTCTT AAAGATTTCA AGATAGCACC GAACGGTAAG
ATTATCGGAA TTTTGGATGG GGTATATGTG CCTGTGGACA GCATCAGCAA TATAAAGAAA
CCATCTGCGA ATACGGGCGC GGCTGACGGC ACAAACGAAA ACCCGCAGGT TGAACAGTCC
CAGACTGAGG AGTCTCAAGT GGAGGAACCT CAGGTCGGAG AACCCCGGGA CGAAGAATCT
GACAGTGTAT AG
|
|---|
| Protein sequence | MAVDAVGRQK TIQEIIDSTT NKSTQRNTGE LGKDEFLNLL ITQLQYQDPL NPVDDKEFIS
QMAQFSALEQ MQNLNKSFSA TKAFGMIGKY ITGTTSNGSD SGAGFVEGIV RSVKMENGKI
LLEVNGLDVP VDNVLSVSEE SNYYYKYNSS NISQYTGIIG YEVSGSVYDP STGDIVGVSG
IVREIQKGIY EDYAVMDGVE VIISGIDTEF NSADPNFRKD YLTENVGQGV SLIITDAYGY
GFKVPVTGVL KDFKIAPNGK IIGILDGVYV PVDSISNIKK PSANTGAADG TNENPQVEQS
QTEESQVEEP QVGEPRDEES DSV
|
|---|
| |