| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0465 |
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| Symbol | |
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| ID | 4808393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 579318 |
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| End bp | 580871 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640105879 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001036896 |
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| Protein GI | 125972986 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGG TACTATCAAA AATGCAGCAG CAGGTCACAG ATTTCTGGAA AAACCTGGAC
AAGTCCCAAA AAACGAGGAT TCTTGTGACT TCCGGTATTT TGGTAGTTGT ACTTACAATA
GCCATAGTAA TGCTTACAAG GACTACATAT GTTCCTTTGA TTACAGTTCA GGATCCTGAT
AGCATTTCTG CTATTGAGGA GGCTCTGAAG GAAAGAAACA TAAAATATAA GCACGGCGAG
GGAAGGCGTA TTCTTGTCGA CTCAAAGGAC AAGAATGAGG CTGAATTTGC TCTTGCATCC
GCAGGATTGA CTGAGCCGGG AATGACATTT GAGGATGCAT GGAGCCTTCT TAAAGTAAGT
TCTTCTGAGA GTGACAAAAA GCAGTTGTGG CAGAATTTCA AGAAAAACAG TCTTATTGCG
AAACTTAAAA TGTTTGACAA TGTAAAAGAC GCCGACATTG AGCTTACAAT ACCGGAAGAT
ACCATGTTTT TCACCGATTC AAAGAGTGAA GCCAAAGCAG CTGTCAGAAT AACTCCCAAG
GGAGAATTAA CTCCCGAGCA GGTTGAAGGA ATAGTTATGG TAGTTGCCTC GTCTATAGAA
GGACTGGATC CTAAAAACGT AACGGTTGTA GACAATAACT TTAATATATT GAATCAAGAT
TTGTCAGACG GCATGAATAT ACCCTCGAGC CATTACAAGC TTAAACTTCG TATAAAGGAA
GAGCTTGAAA AGAATATAAA AAACCTGTAT TCCGGTCGTT CGGACAGCTA TGACTTTATA
AGTGTTGCCG TAAATCCGGT TTTGGATCTG GACAAAGTTA CAAAGAACAG AAAAGAAATT
GAAAAGCCTA CCGGATTGGA TGAGGCTGTA GTCAGTGAGG AAAGAAAAAC CGAAGAGCTG
ATAAACGGAA ATCAAGGCGG CGCTCCGGGA ATGGATGCAA ATCCGGGAAC CGGGGATGTT
CCGACTTATC CTATAGATGC AGGACAAAAC TCTTCTTATG AAAGCAAATC GGAGATAATA
AACAGAATAT TTACCGAGAC ATTGACAGCG GAAGAAAAAG CCATAGGGAC AATGAATTTT
CAAGAATCCT CAATGACGGT TGCCCTGTGG TATGGGAATA GAGTGCCTGA TGACAGCAAA
CTGACAGATG AATTTATAGA AGAGTTTAAA CAGGGGTTGA GCAATGCTAC AGGAATTCCT
GTTGGAAAAA TAACTGTTAA CAAGCAGAAA TTGGCACCTC AGGAGGAAGA GATAGTGCCA
ATGTCCGAAA GGATAAAACA ATTTATAGAT GATTATGGTT TCTTTGCACT GTTGATTATA
TTGATAATTG CGTTAATGCT TTCAGTAATG CCGAGGAAGA AAAAATCACC GCAGCTGGCG
CCTGAACTTG CAACGGCGGG AGGTCCTAAT GTTGATGAAG CTGAAGAAGA ATTGCCTCCT
ATAAACTTTG AAGAACACTC TGAAATCAAG AAACAGATTG AAAACTTTGT AAAACAAAAG
CCGGAGTCAG TTGCGCAGCT TCTTAGAAAT TGGTTGTCCG AAGACTGGGA TTAA
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| Protein sequence | MPEVLSKMQQ QVTDFWKNLD KSQKTRILVT SGILVVVLTI AIVMLTRTTY VPLITVQDPD
SISAIEEALK ERNIKYKHGE GRRILVDSKD KNEAEFALAS AGLTEPGMTF EDAWSLLKVS
SSESDKKQLW QNFKKNSLIA KLKMFDNVKD ADIELTIPED TMFFTDSKSE AKAAVRITPK
GELTPEQVEG IVMVVASSIE GLDPKNVTVV DNNFNILNQD LSDGMNIPSS HYKLKLRIKE
ELEKNIKNLY SGRSDSYDFI SVAVNPVLDL DKVTKNRKEI EKPTGLDEAV VSEERKTEEL
INGNQGGAPG MDANPGTGDV PTYPIDAGQN SSYESKSEII NRIFTETLTA EEKAIGTMNF
QESSMTVALW YGNRVPDDSK LTDEFIEEFK QGLSNATGIP VGKITVNKQK LAPQEEEIVP
MSERIKQFID DYGFFALLII LIIALMLSVM PRKKKSPQLA PELATAGGPN VDEAEEELPP
INFEEHSEIK KQIENFVKQK PESVAQLLRN WLSEDWD
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