| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0446 |
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| Symbol | |
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| ID | 4808374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 561517 |
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| End bp | 562410 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640105860 |
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| Product | peptidase U4, sporulation factor SpoIIGA |
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| Protein accession | YP_001036877 |
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| Protein GI | 125972967 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02854] sigma-E processing peptidase SpoIIGA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000135804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAT ACATCGATGT GCTGGTAATG GAAAACATCG TTATGAATTA TCTTATTTTA
CTGCTTACTG CCAAGTTTAT GAGACACAAG CCGTCTCATT TGCGTTTGTT TCTGGGGGCT
TTGGCAGGGG CGGCATATGT GGTTGTACTG CTTTTGATGC CCAATTTGAA AGTATATTGC
ACCACGTTGG CTAAATTTGC CTTGTCCCTC CTGATTGTTG CAATAGCTTT TTCTCCGGCC
AAACCGGCAC TTTTCATTAA AACACTGGCG GTATTTTATG TTTCGACTTT TATATTTGCG
GGAGCGGCAT TTGCATTTCT TTATTTGAAT CAAACCGGCG GTTTTGTCAG GAACGGCATA
GTGTACATAT GGAATTCGAA AGGAACGACC CTCTTTTTTG CTGTGGCAAC CGTCGGCATA
ATTATAAGAA TTTTCTGGGA CATAGTACAG CAAAGAATTT CAAAAGAAAA GCTTCTCATG
CCTCTAAAGA TTGCTTTTGG AAATGGAACC ATAGAATTGT TTGCTTTGGT TGATACCGGT
AACTCTCTTT GCGACCCGTT GACCAACTCC CCTGTTGTGG TTGTGGAGTT TAATGCCATA
AAAAACATAT TACCCATGGA AATTCAGAGA ATTTTTGATG AATCAAAGGA AAATGACCTG
GACAGTGTGA CCAAAATAGT GTCCGACTCC AAGTGGATGT CCAGATTCAG ACTTATACCT
TTTACCTCAT TGGGCAAAGA GAACGGAATG CTGATTGGGT TCAGACCGGA CTATATTGAA
GTGGGGGAAA ATGCGGAGAA AAAAGGAATA ACGGATGTAA TTATCGGCAT TTATAACAGA
GCTCTGTCAA AGAATAATAA TTACAGTGCA CTACTTAGCC CGGAACTGAT TTAA
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| Protein sequence | MKVYIDVLVM ENIVMNYLIL LLTAKFMRHK PSHLRLFLGA LAGAAYVVVL LLMPNLKVYC
TTLAKFALSL LIVAIAFSPA KPALFIKTLA VFYVSTFIFA GAAFAFLYLN QTGGFVRNGI
VYIWNSKGTT LFFAVATVGI IIRIFWDIVQ QRISKEKLLM PLKIAFGNGT IELFALVDTG
NSLCDPLTNS PVVVVEFNAI KNILPMEIQR IFDESKENDL DSVTKIVSDS KWMSRFRLIP
FTSLGKENGM LIGFRPDYIE VGENAEKKGI TDVIIGIYNR ALSKNNNYSA LLSPELI
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