Gene Cthe_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0400 
Symbol 
ID4808403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp496855 
End bp497883 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content40% 
IMG OID640105814 
Producthypothetical protein 
Protein accessionYP_001036831 
Protein GI125972921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0606591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCAG TAAAAGAATA CAAATGTCCC AGCTGCGGTG CAGGATTGGA TTTTGATCCA 
CCTTCACAAA AATGGAAATG TAACTACTGC TTCAATGAAT ACGAAAAGGA TCAATTTGAC
ATATCCGACA ATGAGGAACT TCTCAATGAG GAAATGCCGG AATTGGATTC ATATATTTGC
AACAGCTGTG GAGCCGAATT GATTGCTGAC AATACCACCT CAGCCACCTT TTGTATTTAC
TGCAAAAGTC CCGCAGTCAT CAAATCAAGA TTTTCCGGGA GATTCAGACC CAGAAATGTA
ATTCCTTTCA GATTGACAAA GGAACAGGCA AAGGAAATCT ATCAAAAGTG GATAAAAAAA
CGCATATTTG CTCCCAAAGA ATTTAAATTA AAAGAGGAAG TTGACAAAAT AACCGGAATA
TATGCTCCCT TCTGGCTCTT TGACTGCAAA GCGGACGGCT TTATCAGCGG AGAAGCCACC
AGAGTCCACT CCTGGAGACA GGGCAACTAC AAATACACTC AAACAAAGTA TTACAGCATT
CTAAGAAGGG GACACGCCCG CTATAAGAGA ATTCCTGTGG ATGCATCCAA AAAACTGGAC
GATAAATATA TGCATATGAT AGAACCTTTT GATTACAAAG ATTTGAAAGA CTTTTCCATG
AAATATATGT CCGGTTTTAT GGCCGAAAGA TATGATGTCG AATCCGCCGA AGCCGTAACT
ATTCTTAAAG ACAGAGTAAA AGACTATCTG TCGGAAAGAC TAAGAGGCAC TGTCAGCGGA
TATTCTTCCT GCAGTATAAC AAGCAAAAAC ATAAATATAT CCGAAATCGA GCAAAGTTAT
TCAATGCTGC CGGTTTATTT ATTGGTAAAC AAATACAAAG ACAAAAGCCA CATATTCATG
ATAAACGGAC AAACCGGAAA AGTCGTCGGA GACACTCCGC TTTGTCTTCC GAAACAAATC
CTTTTTGCAG TTGCAGTTTT CCTGCTCGTA TGGATTATAG GTGTGTTTGG AGGTGCCTTA
TTTGCGTAA
 
Protein sequence
MTSVKEYKCP SCGAGLDFDP PSQKWKCNYC FNEYEKDQFD ISDNEELLNE EMPELDSYIC 
NSCGAELIAD NTTSATFCIY CKSPAVIKSR FSGRFRPRNV IPFRLTKEQA KEIYQKWIKK
RIFAPKEFKL KEEVDKITGI YAPFWLFDCK ADGFISGEAT RVHSWRQGNY KYTQTKYYSI
LRRGHARYKR IPVDASKKLD DKYMHMIEPF DYKDLKDFSM KYMSGFMAER YDVESAEAVT
ILKDRVKDYL SERLRGTVSG YSSCSITSKN INISEIEQSY SMLPVYLLVN KYKDKSHIFM
INGQTGKVVG DTPLCLPKQI LFAVAVFLLV WIIGVFGGAL FA