Gene Cthe_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0353 
Symbol 
ID4808502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp443190 
End bp444305 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content42% 
IMG OID640105767 
Producthypothetical protein 
Protein accessionYP_001036784 
Protein GI125972874 
COG category[S] Function unknown 
COG ID[COG3581] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA CGTTTCCGCA TATGGGTAAC ACATACATTG CAGTAAAGGC TCTTTTGGAC 
GATATCGGAG CAGAGTATGT TATTCCTCCT TTAAACAGCA AACGTTCTTT GGAACTGGGA
ACAAAGTATG CTCCGGAAAT GGCATGCCTG CCCCTTAAAA TCAATATTGG AAATTATATT
GAGGCTTACG AAAAAGGAGC GGATACAATT CTGACTGCCG GCGGACGGGG GCCTTGCAGA
TTTGGGTACT ATTGTGAAAT GTGCAGGGAA ATACTTAATG ACAACGGATA TACCATGGAT
GTGATAGTTT TGGAACCTCC GGATGTGGAA ATTATGAAAT TTATCGGCAA AATCAGAAAG
CTTGCAGGCG GTCTTAATAT ATACCATATT TTAAAGGTAA TAAAAAACAC AACTATTGTG
GCCCAAAGGG TGGATGAACT TGAACGTTTG GCATTTAAAA TCCGCCCCAG AGAGCTTAGG
AAGGGAAGTA CTGACAGAAT TTATGAAGGC TTTCGCAGAA AAGTAATTGA CGTAAAAGGT
TCGCAGGAAA TTCTAAAGCT TGTGGAGGAT ACCAAGAATC AGCTTTTGAA ACTCGAAATA
GACAAAGATG CAAGGCCGCT TAAGATCGCT ATTGTCGGGG AAATTTACAC GACAATAGAC
TCCTATACCA GTTTTAATAT TGATTCGATA TTGGGCGGCA TGGGTGTTGA GGTACACAGG
GCAAACACCA TCAGCGGCTG GATAATCGAG CATATACTGA AAGCAGTTGT TCCGTTTACA
AAAGACAAAA GATATGCTGA GGCTGCAAAG CCTTATCTGG GCACCATGAT AGGAGGGCAT
GCCCAGGAAA CTATTGGGAA TACGGTGCTT TATGCCAAAG ACGGCTTTGA CGGGATAATA
CAGATTTATC CTTTAACCTG TATGCCGGAA ATAGTGGCAG AGAGTATACT TCCTGCTGTG
GAAAGAGATT ATAACATACC CATACTTACC TTGATTATTG ATGAGATGAC GGGAGAAGCC
GGGTATATGA CAAGGATAGA AGCTTTTGTG GATTTACTGA GAAAAAGAAG GGAGAGAGGA
GAAATTGCTG AAAACCTCGT ATTATCTGGG AATTGA
 
Protein sequence
MKITFPHMGN TYIAVKALLD DIGAEYVIPP LNSKRSLELG TKYAPEMACL PLKINIGNYI 
EAYEKGADTI LTAGGRGPCR FGYYCEMCRE ILNDNGYTMD VIVLEPPDVE IMKFIGKIRK
LAGGLNIYHI LKVIKNTTIV AQRVDELERL AFKIRPRELR KGSTDRIYEG FRRKVIDVKG
SQEILKLVED TKNQLLKLEI DKDARPLKIA IVGEIYTTID SYTSFNIDSI LGGMGVEVHR
ANTISGWIIE HILKAVVPFT KDKRYAEAAK PYLGTMIGGH AQETIGNTVL YAKDGFDGII
QIYPLTCMPE IVAESILPAV ERDYNIPILT LIIDEMTGEA GYMTRIEAFV DLLRKRRERG
EIAENLVLSG N