| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0340 |
|---|
| Symbol | |
|---|
| ID | 4808489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 428009 |
|---|
| End bp | 428377 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640105754 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001036771 |
|---|
| Protein GI | 125972861 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3411] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000592647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCT TGGCTGAATT AGAAGAAATA AGAAAGAGGA CTCTTGATCA AATAAATTTG
AGGACCAGCA ATCATGACAT CAGAGTTGTT GTGGGTATGG CCACATGTGG TATCGCTGCC
GGAGCAAGAC CGGTTATGAA TGCGTTTGTT GAAGAATTAA ACAAGAGGAA TTTGACCAAT
GTAGCGGTTA CTATGACAGG ATGTATCGGA ATGTGTAAAC TTGAACCTAT TGTTGAGGTA
ATTGACAAGG ACGGCAGCAA GGTAACATAT GTAAAAATGA CTCCTGAAAA GGTTGCCCGT
GTTGTTGCTG AGCACATAGT CAATGGAAGG GTATGTACTG AGTATACCAT CGCAGAGGCG
GACAAATAG
|
|---|
| Protein sequence | MKSLAELEEI RKRTLDQINL RTSNHDIRVV VGMATCGIAA GARPVMNAFV EELNKRNLTN
VAVTMTGCIG MCKLEPIVEV IDKDGSKVTY VKMTPEKVAR VVAEHIVNGR VCTEYTIAEA
DK
|
|---|
| |