Gene Cthe_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0250 
Symbol 
ID4808598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp305803 
End bp306993 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content41% 
IMG OID640105662 
Producthypothetical protein 
Protein accessionYP_001036682 
Protein GI125972772 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00470202 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA TTAAAGGAAA ATATAATACG GCAAAAGTTT TTACCAACAA CGTTGAACCG 
GAGGCAATGG CTCAGATATT GGAACTTTGC AACCAGGAGT TTGTAAAGGA CAGTGTAATC
AGAATTATGC CTGATACCCA TGCCGGTGCA GGTTGTACCA TTGGAACCAC CATGACCATT
GACGACAAAA TTGTGCCAAA TCTGGTGGGT GTTGATATAG GCTGCGGAAT GGAGACCATA
AAGCTGAAAA ATAAAAATAT TGAATTGAGC AAGCTGGACA AAGTAATTCA TGAATTTATC
CCGTCGGGTT TTGACATTCG CAAAAAAGAG CATCCGTATG TCAGGAATAT TAATTTGGAT
GAGCTATTGT GCAAAAAACA CGTGGATATA AACCGGGCAA AGCTGAGTAT TGGCACCTTG
GGCGGTGGCA ACCATTTTAT TGAGGTGAAC AAAGACAGTG AGGGAAACCT GTATCTTGTG
GTGCATTCGG GAAGCAGACA TCTGGGAAAG CAGGTTGCGG AGTATTATCA GGAGTTGGGT
TACAAGGAGC TTGTAAAAAA CACTGAAGTG ATTAAAGAAA TTATAGCAAA GCTGAAAGCG
GAAGGCCGTG AAAAGGAAAT CGAGAAGGAA ATAAAAAAAA TCAAGCCGCC GAATATAAGC
AAGCAGCTTG CCTATGTCCA GGGCAAAAGT TATGAGGACT ATCTTGCCGA CATGAAATTG
GTGCAGAAAT TTGCGGTATT GAACCGCAAA GCAATTGTGG ATGAGATTGT GAGGCGCATG
AATTTTAAAA TTGAAGAGCA GTTTACCACT ATTCATAATT ATATTGACTT AGACAGCATG
ATACTCAGGA AAGGTGCCAT TTCAGCACGC AAAGGGGAAA GAGTGCTGAT TCCGATTAAC
ATGAGGGACG GAAGCCTTAT CTGTATCGGC AAAGGCAACA AGGATTGGAA CTATTCCGCG
CCCCATGGGG CGGGAAGACT GATGAGCAGG GCTAAGGCAA AAGAAGTTAT AACGCTTAAG
GAATTCAAAG AATCAATGAA GGGAATTTAT TCAACAACGG TCAACAAATC CACCATTGAT
GAATGTCCCA TGGCTTACAA GCCTATGGAG GAAATCATTG AAAATATTCA GGACACCGTT
GAAATTGTAG ATATTATTAA GCCAATATAC AACTTTAAAG CGGCTGAATA G
 
Protein sequence
MIEIKGKYNT AKVFTNNVEP EAMAQILELC NQEFVKDSVI RIMPDTHAGA GCTIGTTMTI 
DDKIVPNLVG VDIGCGMETI KLKNKNIELS KLDKVIHEFI PSGFDIRKKE HPYVRNINLD
ELLCKKHVDI NRAKLSIGTL GGGNHFIEVN KDSEGNLYLV VHSGSRHLGK QVAEYYQELG
YKELVKNTEV IKEIIAKLKA EGREKEIEKE IKKIKPPNIS KQLAYVQGKS YEDYLADMKL
VQKFAVLNRK AIVDEIVRRM NFKIEEQFTT IHNYIDLDSM ILRKGAISAR KGERVLIPIN
MRDGSLICIG KGNKDWNYSA PHGAGRLMSR AKAKEVITLK EFKESMKGIY STTVNKSTID
ECPMAYKPME EIIENIQDTV EIVDIIKPIY NFKAAE