| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0246 |
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| Symbol | |
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| ID | 4808594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 297573 |
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| End bp | 300035 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640105658 |
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| Product | carbohydrate-binding family 6 protein |
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| Protein accession | YP_001036678 |
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| Protein GI | 125972768 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTCTTGTATT TTTAACGGCC TTGAGTCTGA TATTCACGCT GTTTATCAGT
TATTCCCTGT CAGCAGGACC GGCTTCAACC AAGTATGGGG ATCTCAATGC CGATGGCAAG
ATCAATTCGA CAGATTACAA CTTGGGCAAG AGATTGATTC TGAGAACAAT TTCGGAGCTT
CCCATTTCCA ATGGATCTGT AGCCTTTGAC CTTAACGGTG ATTCAAAGGT TGATTCAACG
GACCTTACTG CGCTGAAAAG ATACCTGCTG GGTGTTATTG ACAAGTTTCC GGTGGGCACG
GATATACCAT CCCAAACACA AAAGACGAGA TATCAGGCTG AGGATGCGAT GTTGTACAAG
GCATTCGAGG AAACAATCCA TGCAGGTTAT GACGGGAGAA GTTATGTAAA TTACGACAAC
GAACCCGGAG GATATATTGA GTGGAATGTA AATGTATCCA GTTCAGGTAC ATATAAGCTT
ATTTTCAGAT ATGCAAACGG ATCAAACAAT AACAGACCTA TGGAAATAAG AGTAAATTCC
AATCTGGTTG CAGGTAGTCT GGACTTTTAT CCGACTTCAG CCTGGACTGT ATGGAATGAC
CAAAGCATAG TTGTAACTTT AAATGCGGGC AACAACGTTA TCAGGGCAAC GGGAATTGCC
TCGGACGGCG GACCGAATGT GGATTATCTT GAAGTAATTC CGACAAATGA ACCACCAGCA
CCCACCCCTT CACCGACGCC TACAGTTGGA CCTACACCTG CTGGTGCGCG TCAGATGGAG
AGACTGGACA GAGGGCTTGT GGCGGTAAAA GTAAACAACG GAGTATTTTT AAGCTGGAGA
ATGTTTGGTA CGGATCCTTC CAACATTGCA TTCAACTTGT ACCGCAACGG AACAAAGATA
AATTCCACAC CGATTACCGG TGCGACAAAC TATGTGGATA CCGGCGGAAC GACAAGTTCA
ACATACACGG TACGTGCGGT TATTAACGGA CAGGAACAGG AGGCATCAAA ACCTGTAAGT
GTCTGGGCTC AGAATTATCT TCAGATTCCC ATTCAGCCAC CGTCAAGCGC GTACGAGGCT
AATGACTGCA GTGCCGCAGA CCTTGACGGA GACGGAGAAT ATGAAATTGT GTTAAAGTGG
GAGCCAAATA ACGCAAAAGA CAATTCCCAA TCCGGATATA CCGATAATGT GTATTTGGAT
GCTTACAAGC TGAACGGCAC ACGTTTGTGG AGAATAGATC TTGGAAGAAA TATCCGTGCC
GGTGCCCACT ATACCCAGTT TATGGTTTAT GACCTTGACG GCGACGGCAA GGCAGAGGTT
GCATGCAAGA CAGCTGACGG AACAAGAGAC GGAAAAGGAA ATGTGATAGG CAATCCAAAT
GCGGATTATC GTAATTCAAG CGGATACATA CTTTCAGGAC CTGAATACCT GACAGTATTC
GATGGACAGA CAGGTGCCGC CATTACAACG GTGGATTATG ATCCTCCGAG AGGAAATGTC
TCTTCATGGG GTGACAATTA CGGAAACAGA GTGGACCGTT TCCTGGCGTG CATAGCATAC
CTTGACGGTC AAAGACCAAG CCTTGTCATG TGCCGCGGAT ATTATACAAG AAGCGTGCTT
GTGGCCTGGG ATTTCAGAAA CGGAAGGCTT ACAAAGAGAT GGGTATTTGA CGGCAACAAT
TACAGCGGAT ATAACGGACA GGGTAATCAC AACCTGAGTG TGGCCGATGT TGACGGCGAC
GGAAGAGATG AGATTATTTA CGGTGCATGT ACCATTGATG ACAACGGAAA AGGATTGTAT
ACTTCAGGAC TTGGCCATGG GGACGCTCTG CATGTGGGAG ATCTTAATCC CAACAGACCG
GGCCTTGAAA TTTGGAGCTG CTTTGAAAGC TCCGGCGGCG CTGCTTTGCG TGATGCAAGG
ACAGGAGAAG TGTTGTTCAG ATGGCATAGA TCCAGTGATA CAGGAAGGGC TTGTGCGGCT
GATATAACGG CATCATCTCC GGGAGCTGAG CTTTGGGCTG CAGGTTCTCC GCTGTTCAGC
TGTACCGGTC AGAATATAGG AACTGCTCCA AGCCAGATTA ACTTTGCTAT ATGGTGGGAC
GGAGACGAAC TCAGGGAGCT CCTTGACGGC ATTACAATAA GCAAATACGG TGTAGGAACA
TTGTTTACCG CGACCGGATG TGCTTCCAAC AACGGTACAA AATCAACTCC GTGCCTCCAG
GCAGACCTCC TTGGAGACTG GAGAGAAGAA GTAATCTTTA GAACTTCGGA CAACAGGTAT
TTGAGAATAT ACACCACAAC GGCAACAACA AACAGACGTA TTTACACATT AATGCATGAT
CCGGTTTACA GATTGGGTAT AGCCTGGCAG AATGTAGCAT ACAATCAGCC GCCGCACACA
AGCTTCTTTA TCGGAGCCGG CATGGCTGAG CCTCCGAAGC CAAATATTTA CCTTGTGCCG
TAA
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| Protein sequence | MKKTLVFLTA LSLIFTLFIS YSLSAGPAST KYGDLNADGK INSTDYNLGK RLILRTISEL
PISNGSVAFD LNGDSKVDST DLTALKRYLL GVIDKFPVGT DIPSQTQKTR YQAEDAMLYK
AFEETIHAGY DGRSYVNYDN EPGGYIEWNV NVSSSGTYKL IFRYANGSNN NRPMEIRVNS
NLVAGSLDFY PTSAWTVWND QSIVVTLNAG NNVIRATGIA SDGGPNVDYL EVIPTNEPPA
PTPSPTPTVG PTPAGARQME RLDRGLVAVK VNNGVFLSWR MFGTDPSNIA FNLYRNGTKI
NSTPITGATN YVDTGGTTSS TYTVRAVING QEQEASKPVS VWAQNYLQIP IQPPSSAYEA
NDCSAADLDG DGEYEIVLKW EPNNAKDNSQ SGYTDNVYLD AYKLNGTRLW RIDLGRNIRA
GAHYTQFMVY DLDGDGKAEV ACKTADGTRD GKGNVIGNPN ADYRNSSGYI LSGPEYLTVF
DGQTGAAITT VDYDPPRGNV SSWGDNYGNR VDRFLACIAY LDGQRPSLVM CRGYYTRSVL
VAWDFRNGRL TKRWVFDGNN YSGYNGQGNH NLSVADVDGD GRDEIIYGAC TIDDNGKGLY
TSGLGHGDAL HVGDLNPNRP GLEIWSCFES SGGAALRDAR TGEVLFRWHR SSDTGRACAA
DITASSPGAE LWAAGSPLFS CTGQNIGTAP SQINFAIWWD GDELRELLDG ITISKYGVGT
LFTATGCASN NGTKSTPCLQ ADLLGDWREE VIFRTSDNRY LRIYTTTATT NRRIYTLMHD
PVYRLGIAWQ NVAYNQPPHT SFFIGAGMAE PPKPNIYLVP
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