| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0115 |
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| Symbol | |
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| ID | 4808741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 147032 |
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| End bp | 149011 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640105526 |
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| Product | glycogen debranching enzyme, putative |
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| Protein accession | YP_001036549 |
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| Protein GI | 125972639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTG GAAAATCCAG CTGGAGAACT TATGAGCAAG GGATTCAACG GGAATGGCTT
CTAACCAACG GCATAGGAGG ATTTGCATCA TCCACGATTA TAGGTTCGAA CACCCGAAGG
TACCATGGTC TGTTGGTGGC GGCACTGAAA CCTCCTGTAA GCAGGCACTT GATATTGTCC
AAAATTGATG AATGTGTAAC TGTTGACAAT GAATCGTTCA ATTTGTTTTC TTATGAAGTG
CCGGGTTTTA TAATGCATGG ATATCATCAT CTGGAACGAT TTGAATATGA TATGCTTCCT
AAATATATAT ATAGAGTAAA GGATGTATAT GTTGAAAAGG AAATATGCAT GGTTTACGGT
GAAAACACCG TTGTTGTGGT TTACCACGTC ATAAACGGGA CCGGAAGAAC CAATTTGAGA
CTTACTCCTC TTGTGAATTT CCGGGACTAT CATTTTAACT CCGGCAGAGC ATATATGAGT
TTTGAAAGAA AATTTGAAAA AGATGTTTTA ACGGTGCGAC CTTCCTGCTA CGACATTGAC
ATTAAGCTGT ACTCAACTGA TGGGAAATTT ACGGAGCTTG ACGATACCTG GTTTTACAAC
ATGGATTATG CTGTGGAAAG GGAAAGAGGT TTGGCCTCCA CCGAGGATCA TTATATACCC
GGGTATTATG ATATTGAAAT AAAACCTTTG GAGGAAAAAT ACATAACCTT TGTAGCTACC
GTCGAAAAAA ACGTAAATCA CAGAGACGGG CTTAAAATAA TAGAAAAAGA AAAAAAGAGG
CTTAAAAAAC TGGCAAGTAA AGCGGGATAC AAGGATGAGC TGGCAAAAAA ACTGGTTTTG
GCGGCAGACA AATTTATAGT ACACAGGGAA TCCACTAATG CGAAAACCGT AATTGCAGGA
TATCCGTGGT TTACGGATTG GGGAAGGGAT ACCATGATAT CTCTTGCGGG ACTTACGCTG
GCAACCCGGC GTTTTGAGGA TGCAAAGGAG ATTCTTTATA CTTTTTCAAA ATATGTCAAA
GACGGACTTA TACCGAACAT GTTCCCCGAT GCGGGACATG AGCCGCCGTA CAACACCGTT
GATGCCGCTC TGTGGTACTT TGAAGCTGTA AACAAGTATG TAAATTACAC CCATGATTAT
AAGTTCATAA AAGAAAATAT ATACAGTGGA TTGAAACAGA TAATTGAGTA CTACTCAAAA
GGAACCCACT TTAATATAAA AGCTGATGAG GATTATTTAA TCAGTGCCGG AGATGAACAT
ACCCAGCTTA CATGGATGGA TGCGAAAGTG GGTGACTGGG TGGTTACTCC GCGTCATGGA
AAAGCTGTGG AGATAAATGC TTTGTGGTAT AATGCCTTAA AAATTATGTC GCAGCTTTCG
AAACATTTTA AAGAAGATGC CGGATTATAC GATGAAATGG CCGAAAAAGT CAAGAAGTCT
TTTGAAGAGA AGTTCTGGAA TGAAGAGAAA AAATGTCTTT ATGACTGTCT TACACCAAAT
TATAAAGATG ATAAAGTAAG GCCGAACCAG ATATTGGCTG TAAGTCTTTC CTATCCGGTA
ATAGAAGGAG AAAAGGCAAA GAGTGTTGTG GATATTGTTT TTAAAGAGCT CTATACCGCT
TATGGCTTAA GGAGTCTGTC ACCTAAAGAA AAGGAATATG TGGGAGTGTA TATGGGTGAT
CAATACAGAA GGGACGGAGC ATACCATCAG GGCACGGTCT GGACATGGCC TTTGGGCCAC
TTTATAACTG CGTATCTCAG GGTAAACAAT TATTCGCCGG AGGCCAGGAA AATGGCTTTA
AGATTTATTG AGCCCTTTAA GGACCATCTT CAGGATGCCT GTCTTGGTTC TGTTTCCGAG
ATATTTGACG GTAATGAGCC GTTGATACCA AGAGGCTGTT TTGCACAGGC CTGGAGTGTG
GCAGAGATAC TCAGAGCCTA TGTTGAGGAC GTGATGCAGT TGGTACAGCT AAAACACTAG
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| Protein sequence | MNFGKSSWRT YEQGIQREWL LTNGIGGFAS STIIGSNTRR YHGLLVAALK PPVSRHLILS
KIDECVTVDN ESFNLFSYEV PGFIMHGYHH LERFEYDMLP KYIYRVKDVY VEKEICMVYG
ENTVVVVYHV INGTGRTNLR LTPLVNFRDY HFNSGRAYMS FERKFEKDVL TVRPSCYDID
IKLYSTDGKF TELDDTWFYN MDYAVERERG LASTEDHYIP GYYDIEIKPL EEKYITFVAT
VEKNVNHRDG LKIIEKEKKR LKKLASKAGY KDELAKKLVL AADKFIVHRE STNAKTVIAG
YPWFTDWGRD TMISLAGLTL ATRRFEDAKE ILYTFSKYVK DGLIPNMFPD AGHEPPYNTV
DAALWYFEAV NKYVNYTHDY KFIKENIYSG LKQIIEYYSK GTHFNIKADE DYLISAGDEH
TQLTWMDAKV GDWVVTPRHG KAVEINALWY NALKIMSQLS KHFKEDAGLY DEMAEKVKKS
FEEKFWNEEK KCLYDCLTPN YKDDKVRPNQ ILAVSLSYPV IEGEKAKSVV DIVFKELYTA
YGLRSLSPKE KEYVGVYMGD QYRRDGAYHQ GTVWTWPLGH FITAYLRVNN YSPEARKMAL
RFIEPFKDHL QDACLGSVSE IFDGNEPLIP RGCFAQAWSV AEILRAYVED VMQLVQLKH
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