Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0003 |
Symbol | |
ID | 4808816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2599 |
End bp | 3528 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640105413 |
Product | ankyrin repeat-containing protein |
Protein accession | YP_001036438 |
Protein GI | 125972528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGGA AAAAGATAAT GATTGTTATG CTGATTGTTG TAATGACTTT TCCGATTTTA TTATCTTCAT GTCAATTTGA TATATTAGGG AAAGAGGAGG AATATAGGAT TACAAACGTA AAAATTTTTA AGGACACACC GGTATGGGAA CTGGCATTGG CTGTTAAGAA TGAGAAAACC CGTACAATAG AGAAATTGGC AAAAGAGAAT CCGGAGTTGC TGAATTATCA GGAACCGAAA TATGGAGCGA CTTTACTGTT GTGGGCAGTT GGGATGGAAA AGTATAAATC TGCAGAAGCA CTATTAAAAT GTGGAGCTGA CCCCAATATT GCCTCAACAG TTGACGGAAT GACTCCGCTT TATTTGGCAG CAGGATTTTC TTGGATAGAC AATTACGCGA AAAAAGACCC TAAGTTTGTA AAGCTCCTAC TGAAATATAA TGCAGACCCA AACATAACTT ATGGTGGAAA TGCCATTATT GAGCCAGGAA CTAGTCCGCT TATGAACTCA ATACGATGTG GTATTGAAAA AACGAAAGCA TTAGTAGAAG CAGGAGCTTA TATCAACTAT AAAACTAAAA GTGGGACTAC AGCTGCAATT AAAGCATTGC TAGCCGGTCA AAATGCGACA TTGGAAGCAT TGGAATATGC ACATTATTTG ATAGTAGAGA AGAAAGCTAA GGTAACAGAT CCCTATTATC CATGGTTGGT TTATGAAGAA AACAATATCC AAGAATTATA TCCGGTGGAT ATATTAAGGC GTTGGGTTTA TCCATTGGAT TCGGAAGAAT ACCGAATAAA AATGGAGATT GTAGAGGAAT TTGCCCGACA AGGTGTAAAT TATTGGGATA CAGAAATTGA TAAATATACT CTTGAACAGA TAAAAAAGCT TTATCCTGAT ACTTGGGAGG AATATATAAA AAGGTATTAA
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Protein sequence | MSRKKIMIVM LIVVMTFPIL LSSCQFDILG KEEEYRITNV KIFKDTPVWE LALAVKNEKT RTIEKLAKEN PELLNYQEPK YGATLLLWAV GMEKYKSAEA LLKCGADPNI ASTVDGMTPL YLAAGFSWID NYAKKDPKFV KLLLKYNADP NITYGGNAII EPGTSPLMNS IRCGIEKTKA LVEAGAYINY KTKSGTTAAI KALLAGQNAT LEALEYAHYL IVEKKAKVTD PYYPWLVYEE NNIQELYPVD ILRRWVYPLD SEEYRIKMEI VEEFARQGVN YWDTEIDKYT LEQIKKLYPD TWEEYIKRY
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