| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3889 |
|---|
| Symbol | |
|---|
| ID | 4796451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009007 |
|---|
| Strand | - |
|---|
| Start bp | 59093 |
|---|
| End bp | 59803 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640103000 |
|---|
| Product | Short-chain dehydrogenase/reductase |
|---|
| Protein accession | YP_001033849 |
|---|
| Protein GI | 125654655 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.521289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA AGACCGTCCT CATCACGGCG GCCGGGCAGG GCATCGGCCG CGCCTGCGCC
GAGCGTTTCC TGGCCGCCGG CGCGCGGGTA TTGGCCAGCG ACCGCGATGC GCGGCTTCTG
GATGGGCTGG CGGCCGAGTG CCATGCGCTC GATGTGCGCG ACGGGGCGGC GGTGGAGGCC
CTGGTCGCGG GGCTCGGCCC GGTCGATGTG CTCGTGAACT GCGCCGGCGT CGTGCATGGC
GGCACGATAC TCGATCAGAC CGAGGCCGAG CTGGATCTGG CGCTGGACAT CAACCTCAGG
GGCACGATCC GCACCATTCG GGCGGTGCTG CCCGGAATGC TGGCGGCGGG CTCGGGCAGT
ATCGTCAACA TCGCCTCGGT GGTCAGCAGC CTCAAGGGGG CGCCCGACCG CTGCGTCTAT
GGCACCAGCA AGGCGGCGGT GATCGGATTG ACCAAATCGG TTGCAGCGGA TTTCGTTTCG
AGAGGCATCC GCTGCAATGC GATCTGCCCC GGAACCGTCG AGAGCCCCAG CCTGCGCGAG
AGGCTCGGCG CCACAGGCGA TGCGGAGGCC GCCCGTGCGG CCTTCGTTGC CCGCCAGCCG
ATGGGTCGGC TGGGCACGCC GGAAGAGATC GCCGATCTCG CGCTCTGGCT GGCCTGTTCG
GGCTATACGA CAGGGCAGGC CATCGCGATC GATGGCGGCT GGACGATCTG A
|
|---|
| Protein sequence | MQEKTVLITA AGQGIGRACA ERFLAAGARV LASDRDARLL DGLAAECHAL DVRDGAAVEA
LVAGLGPVDV LVNCAGVVHG GTILDQTEAE LDLALDINLR GTIRTIRAVL PGMLAAGSGS
IVNIASVVSS LKGAPDRCVY GTSKAAVIGL TKSVAADFVS RGIRCNAICP GTVESPSLRE
RLGATGDAEA ARAAFVARQP MGRLGTPEEI ADLALWLACS GYTTGQAIAI DGGWTI
|
|---|
| |