Gene Mlab_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1709 
Symbol 
ID4795014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1744073 
End bp1746139 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content50% 
IMG OID640100400 
Producthypothetical protein 
Protein accessionYP_001031137 
Protein GI124486521 
COG category[R] General function prediction only 
COG ID[COG1033] Predicted exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACA TATCCGGAAC CATCCTGCAA AAAAGAAAAC AGGTTATTAT CATAACCCTG 
CTGATCGCCG TTCTCTGTCT GATTCTGATA CCGCAGGTCT CCGTAAACTA CAATATCATT
GATTATCTCC CCGATGAAGC TCCCTCGACC ATCGCTCTTG ATGTGATGAA CGAGGAGTTC
ACGCAAGGGG TGCCCAATGC ACGTATTATG GTGCCGGACA TCACGATACC GGAAGCACTT
GAACTGAAAA AACAATTCGC TGCCGTCGAC GGTGTCGAAG AGGTAACATG GCTCGATGAT
GCCGTCTCTC TTGACGTACC GTTCGAAACC CTCGACACAG ATGCCGTCGA AGCGTATTAC
AAAAACAACA CCGCCCTTTT CAGCATCACC CTCGACAATG AAAAAGCCAC TTCCGCCGTC
AACGAACTTG CAGAACTTGC CGGTGACGAT GCCGCCATGT CGGGCCTCTC CGTCTCCTCG
ACCTTCTCGA AAGGAACGCT TTCAAGCGAT ATCGTCAAGA TCTTCCTGAT TGCAATACCT
TTCATCCTTG CCATTCTCTT CCTGACGACC ACTTCATGGT TCGAACCTTT TCTCCTGATG
TTCACGATAG GAGTTGCCAT CGTCATCAAC ATGGGAACCA ATATCATATT CGGAGAAATA
TCGTTCATCA CGCAGGGAGT TGCGGCCATT CTGCAGCTTG CAATCGCTCT TGATTACGGA
ATCTTCGTTT TGTACCGGTT CACCGAGATC CGCAAAGACG GGATCCCGGT CTTTGAATCG
ATGAAGCATG CCCTCGTCAA ATCCATAGGC TCGGTCACCG CATGCGGTAT TGCCACGCTG
ATCGGTTTTG CCGCCCTTAT CCTGATGAGA ATCCAGATCG GTCCGGATCT TGGCCTTGTT
CTGACGAAGG GAATCGTCAT CAGTCTTCTC TGCGTTTTCA CGCTTCTGCC GGCGCTCACG
CTTGTCTGCA GCAAACTCAT CGAAAAGACT CAGCACCGTC CGTTCATTCC CGATCTGAGA
AAACTCGCAA AGTGCCTCGT CAAATTAAGC TTCCCCGCTC TCATCATCTT TGCCCTGATC
GTGATACCTT CGGTTATCGC CATCGAAAAC AACGATTATG TCTACTTCGA TCTCTTCTCC
GACGAACGGA CAGCTATCGG TCAGGATGCC ATAGCGATCA CTGATACCTT CGGTGGGGCC
TCCTCTCTTG TCCTCATGGT CCAGAAGGGG AATCTCGCAG AAGAGCAGGA AGTGCTTGAT
CAAATCGAAG AGATACCCAA TGTTGTGTCG GTGATATCCT ACGTGGGCAC AGTCGGTGCG
GAAATTCCGC AGGAGTATGT CCCTGGAAGC ACCCTGTCCG AACTGGAATC CGCCAACTAC
AGCAGGATGA TCATCACCGT CGACACCTCT CTCGAAGATC CCGAATCCTT TGCGGCGATT
GAAAATATCC GGGCTATCGG TGAAGAGCAT TATCCCGGGG AATGGTATCT GGCAGGAGAG
ATCGCCAACG CTTACGATAT GAAATCGTTT ATCGAAGAGG ATAATATCAA AATCGAGGCG
GTCGGCATCA TTGCGATCTG CATCGTCATT CTGATAGCAT TCCAATCCAT CTCCCTCCCA
CTGATCCTCG TTCTCGTCAT CAAATCGGCG ATCTGGATCA ACTGCGCAAT ACCCTACTTC
CAGGGAGAGC CGATGTTCTA CATCTCGTAT CTGGTCATCA GTTCTCTCCA GCTCGGCATT
ACTGTCGATT ACGCGATTAT GTTTACCAGC CGGTATGTTG AGTTTAGAAA GCTTCACCCC
AAGCGGGAGG CCGTCGAGCT GACCATCTCG AAGGCGGCGG TCTCGATTCT CGTCTCCGCC
TTCATTCTTC TGGTAGCCGG TCTTGCCTTG TGGATCTTCT CCTCGAATGC TCTCTTAAGC
GAAGTTGGGA TGCTTGTTGG CCGAGGGTCA ATCCTTTCGA TCCTTGCAGT ACTGTTCGTC
CTGCCGGCTC TTCTCCTGAT CTTCGATAAG ATCATCCAGA AAACATCTCT GAACATGCAG
TTTGTGCCTG ATACAACAGG AGTATAA
 
Protein sequence
MIDISGTILQ KRKQVIIITL LIAVLCLILI PQVSVNYNII DYLPDEAPST IALDVMNEEF 
TQGVPNARIM VPDITIPEAL ELKKQFAAVD GVEEVTWLDD AVSLDVPFET LDTDAVEAYY
KNNTALFSIT LDNEKATSAV NELAELAGDD AAMSGLSVSS TFSKGTLSSD IVKIFLIAIP
FILAILFLTT TSWFEPFLLM FTIGVAIVIN MGTNIIFGEI SFITQGVAAI LQLAIALDYG
IFVLYRFTEI RKDGIPVFES MKHALVKSIG SVTACGIATL IGFAALILMR IQIGPDLGLV
LTKGIVISLL CVFTLLPALT LVCSKLIEKT QHRPFIPDLR KLAKCLVKLS FPALIIFALI
VIPSVIAIEN NDYVYFDLFS DERTAIGQDA IAITDTFGGA SSLVLMVQKG NLAEEQEVLD
QIEEIPNVVS VISYVGTVGA EIPQEYVPGS TLSELESANY SRMIITVDTS LEDPESFAAI
ENIRAIGEEH YPGEWYLAGE IANAYDMKSF IEEDNIKIEA VGIIAICIVI LIAFQSISLP
LILVLVIKSA IWINCAIPYF QGEPMFYISY LVISSLQLGI TVDYAIMFTS RYVEFRKLHP
KREAVELTIS KAAVSILVSA FILLVAGLAL WIFSSNALLS EVGMLVGRGS ILSILAVLFV
LPALLLIFDK IIQKTSLNMQ FVPDTTGV