Gene Mlab_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1613 
Symbol 
ID4795515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1641196 
End bp1643394 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content53% 
IMG OID640100298 
Productelongation factor EF-2 
Protein accessionYP_001031042 
Protein GI124486426 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR00490] translation elongation factor aEF-2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.502666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCG GAAAAAAGAT GGTAGAACGA ATTACGGAGC TCATGAATGA TCCCGAGCAC 
ATCCGTAATA TCGGTATCGT AGCGCACATT GACCACGGAA AGACCACCCT TTCAGATAAC
CTTCTTGCCG GCGCAGGAAT GATCAGCGAG GAACTATCCG GTAAAGCCTG CTGGATGGAC
TCGGATGAGG AAGAGCAGGC ACGCGGTATC ACCATTGATG CATCGAACGT ATCCATGGTC
CACAAAGTCG GCGACCACGA GTATCTTATC AACATGATCG ATACTCCCGG CCACGTCGAC
TTCGGCGGAG ATGTTACCCG TGCAATGCGT GCAGTCGACG GCGCAGTCGT CGTTGTGGAC
GCAGTCGAAG GTCCGATGCC CCAGACGGAG ACCGTTCTTC GTCAGGCACT CAAAGAGGGT
GTTCACCCGG TCCTGTTCAT CAACAAGGTC GACAGACTTA TCAACGAACT GAAGGTCAAC
CCGCAGGAAA TGATGATCCG CCTTGGAAAA GTTATTGACA AGGTCAACAA GCTTATCAAA
GGCATGAACG AGGATCTCTA CACCAACGGC GGCTGGAAAC TCGATGCAAT GAAAGGAAAC
GTCGCATTCG GATCCGCTCT TTACAACTGG GCAATTTCGA TCCCCTACAT GAAGAAGTCC
GGCGTCACGC TCCAGACCGT TATCGACAAG TGTAACGAGG GCGACTCGAA GTACCTTGCA
AAGGCATCCC CGCTTCACGC AGTCCTTCTC GATATGGTCG TAACCTTCCT CCCGAACCCG
CTCCAGGCAC AGGGTAAGAG ATGCCACATC ATCTGGCACG GCGATGTTGA GTCACCGATC
GGAAAGGCAA TGTACGCCTG CGATTCAAAC GGTCCGGTCG CTATGATGAT CACCGATATC
TCCTTCGATA AACACGCAGG AGAGGTCGCA ACCGGTCGTT TATTCTCGGG AACCCTTTCC
CGCGGTCAGG AGGTCTTTAT CTCCGGTACT GCAGGTAAGC CGAACAGACT TCAGGGTGTC
GGTATCTTCA TGGGTCCGAC CCGTGTTGAA GTAGATAAGA TCGTTGCCGG AAACATTGCG
GCAGTCACTG GTCTCAGCGA TGCTATCGTC GGTTCAACCG TTACGTCCCT TAAGGATATG
ACGCCGTTCG AATCCCTCAA GCACTACTCC GAGCCTGTTA TGACCGTCGC GGTCGAAGCA
AAGAACATGA AGGATCTTCC AAAACTCATC GAAGTTCTTC ACCAGGTAGG TAAAGAGGAT
CCGACCGTTC GTATCAACAT CAATGAAGAG ACGGGCGAGC ACCTTATCGC CGGTATGGGC
GAACTCCACC TTGAGGTCGT TACCGGCCGT ATCAAGAGAG ATAAGGGTGT AGAGATCGTT
ACGTCCCCGC CGATCGTTGT GTACCGTGAG ACGGTTTCCA AGCCGCTTGA GGGTACTGTC
GAAGGTAAGT CTCCAAACAG ACACAACAGA TTCTTTATGT CTGTCGAGCC GATGCCGGAA
GCCATTCTTA ATGCGATCCA GTCGAACGAG ATCTCCATGA ACATGGACAA CATTGCCCGC
CGTGATGCGC TTGTCGCACT TGGCATGGAC AAGGATGAAG CCAAGTCCGT GAAGGATATC
TACGGCTCGA ACATGTTCAT CGACTGCACG AAAGGTATTC AGTACCTGAA TGAAACGATG
GAACTGATCA TCGACGGTAT TCACGAGGCA CTCGACGGCG GACCGCTCGC TGACGAGCAG
GTTCAGAATG TTCTGATCAA GCTGCACGAT GTGAAGCTTC ACGAGGATGC TATCCACCGT
GGTCCGGGAC AGGTCATTCC GGCAGTTCGC GGCGGTATGA AGGCGGCTCT TCTTATGGCC
GGCGACACGC TGCTTGAACC GATGCAGAAG ATCCAGATCA CCGTTCCGCA GGATCAGATG
GGAGCTGCCA TTTCCCAGAT CCAGGGACGC CGCGGTCAGC TGTCCACGAC CGAGTCCGAG
GGTGACCAGA TCGTGGTTAA CGGTGAGGCA CCGGTTGCCG AGCTCTTTGG TTTCGCGGGC
GATATCCGTT CAGCAACCGA AGGCCGCGCT ATGTGGTCTA CCGAGTTCGC AGGTTTCTCC
GCTGTTCCCC AGGGAATGCT TTCCGAGATC GTTATGGGTA TCAGAAAGAG AAAGGGTCTC
AAAGAACAGA TCCCGACTCC GAAGGATTAC CTCGAGTAA
 
Protein sequence
MSRGKKMVER ITELMNDPEH IRNIGIVAHI DHGKTTLSDN LLAGAGMISE ELSGKACWMD 
SDEEEQARGI TIDASNVSMV HKVGDHEYLI NMIDTPGHVD FGGDVTRAMR AVDGAVVVVD
AVEGPMPQTE TVLRQALKEG VHPVLFINKV DRLINELKVN PQEMMIRLGK VIDKVNKLIK
GMNEDLYTNG GWKLDAMKGN VAFGSALYNW AISIPYMKKS GVTLQTVIDK CNEGDSKYLA
KASPLHAVLL DMVVTFLPNP LQAQGKRCHI IWHGDVESPI GKAMYACDSN GPVAMMITDI
SFDKHAGEVA TGRLFSGTLS RGQEVFISGT AGKPNRLQGV GIFMGPTRVE VDKIVAGNIA
AVTGLSDAIV GSTVTSLKDM TPFESLKHYS EPVMTVAVEA KNMKDLPKLI EVLHQVGKED
PTVRININEE TGEHLIAGMG ELHLEVVTGR IKRDKGVEIV TSPPIVVYRE TVSKPLEGTV
EGKSPNRHNR FFMSVEPMPE AILNAIQSNE ISMNMDNIAR RDALVALGMD KDEAKSVKDI
YGSNMFIDCT KGIQYLNETM ELIIDGIHEA LDGGPLADEQ VQNVLIKLHD VKLHEDAIHR
GPGQVIPAVR GGMKAALLMA GDTLLEPMQK IQITVPQDQM GAAISQIQGR RGQLSTTESE
GDQIVVNGEA PVAELFGFAG DIRSATEGRA MWSTEFAGFS AVPQGMLSEI VMGIRKRKGL
KEQIPTPKDY LE