| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1580 |
|---|
| Symbol | rplP0 |
|---|
| ID | 4794802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1612733 |
|---|
| End bp | 1613581 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640100267 |
|---|
| Product | acidic ribosomal protein P0 |
|---|
| Protein accession | YP_001031011 |
|---|
| Protein GI | 124486395 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000450867 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00704406 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTT ATACCCACCA TCTTCCCGCA TGGAAACGTG AAGAAGTTGA GCAGATCAAA
GATCTCGCCG ACAAGTATGC ACTCGTCGGC TTAGTTGATG TCTACGGTAT TCCCGCAAGA
CAGTTCCAGC AGATCCGCAG AAATCTGCGC AGCAATGCAG TTGTGAAGGT TGCAAGAAAC
ACCCTTGTCG AGCATTCCAT GAATGAACTC GGCGGTCACT TCGTTGATCT GAACGGGAAG
GTTTCCGAAC ACTCCGCCCT CATCTTTGCA AACGGCAACC CCTTTAAGCT GTTCAAGTCC
CTTGAGCAGA CGAAGACAAA GCGTTCCGCA AAAGCAGGCG AGATCACTCC TGAAGACATT
GTTGTTCCGG CAGGACCAAC TACCTTTAAG CCCGGACCGA TCGTAGGAGA ACTCCAGCAG
GCTGGTATCC CGGCAGCTAT CGACGGCGGA AAGGTCAAAA TCAAAGAGAC CAAGACCGTT
GTTAAAGCTG GCGAGGCTAT CAACAAGAAA CAGGCCGATG TGCTTTCAAA GCTTGGCATT
AAACCAATGC CGGTCGGTCT CTCCCTCCTC GCAGTATGTT ACGAGGGAGA CCTGTATCTG
CCGGACGTCC TCTCTGTAGA CGACGAGGCA TACAAGGCAA AGATCACTCT CGCAGCACAG
CAGGCATTCA ACCTCGCAGT CAACGCAGCA GTTCCAACGG CATGTGTCGG TGTTACTGAG
GCTCAGATCG CGAAGGCCGT CCGTGAGGCA AGAAACCTCG GTGTAGAAGC ATCCATCTAT
GAGAAGGGTG TCATCGAGCT GATCATCAGC AAGGCATACA GACAAGCAAA CGCCCTGAAG
GCAATTTAA
|
|---|
| Protein sequence | MAIYTHHLPA WKREEVEQIK DLADKYALVG LVDVYGIPAR QFQQIRRNLR SNAVVKVARN
TLVEHSMNEL GGHFVDLNGK VSEHSALIFA NGNPFKLFKS LEQTKTKRSA KAGEITPEDI
VVPAGPTTFK PGPIVGELQQ AGIPAAIDGG KVKIKETKTV VKAGEAINKK QADVLSKLGI
KPMPVGLSLL AVCYEGDLYL PDVLSVDDEA YKAKITLAAQ QAFNLAVNAA VPTACVGVTE
AQIAKAVREA RNLGVEASIY EKGVIELIIS KAYRQANALK AI
|
|---|
| |