| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1509 |
|---|
| Symbol | |
|---|
| ID | 4795378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1543621 |
|---|
| End bp | 1544907 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640100193 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_001030940 |
|---|
| Protein GI | 124486324 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
|---|
| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.778286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGG AACATTCCCA GCACGAAATC GAAAAGGATG AAGCAAGAAA GCGATATGAG
TTCAAAAAAT CACTGGAACG ACTGGAGGAG AAAGAGGGGT CGGGAACAGA ACTGATCTCT
CTCTATATCC CCCCGGATAA GCAGATATAT GATGTAACTG CCCAGCTTCG CGATGAATAT
GGTCAGTGCG CGAACATCAA AAGCAAACAG ACACGGTCAA ATGTTCAGAG CGCTCTCTCT
TCAATTCTTG CACGCCTGAA ATACTTCAAA ACACCCCCGG AAAACGGCAT GGCGATTTTC
TGCGGAGCAA TCAACGTGGG CGGCGACAAA ACCGATCTGG AGTCCATCAT CGTCGAACCT
CCGGAGGTCA TCCAGACTTA CAGTTACCGG TGCAGTTCTA CCTTCGAACT TGAACCTCTT
AAGGCGATGC TCGATGACAA ATATGTATAT GGGCTTTTAG TCATCGACCG TCGCGAAGCC
TACTGGGGTT TCCTTCGAGG AACGCACATT GAGCCGATCA ACGGAACCAA CTCCACCGTT
CCCGGAAAAC AAAGGAAAGG TGGTCAGTCC AGTGTCCGTT TCGAACGCCT CAGACTGATT
GCGATCCATG ATTTCTACAG CAAAGTCGGC GAACGTGCTT CGGCGGCGTT CCTTGCCGAG
CCCAACTTCT TTGAAAAGTT CAAGGGAGTT TTGATCGGCG GTCCGATGCC GACCAAAGAG
GAGTTCGCCT CCGGCGATTT CCTTCACCAC GAAGTCAAGA AACGGATCAT CGGTCTCTTT
GATGCATCCT ACACCAATGA ATTCGGTCTG CGCGAACTGG TGGACAATGC CCAGGATGCT
CTTCGCGGTG TCGGAATAAT GGACGAAAAA GCAGAAATGT CCAGATTCTT CAAAGAACTC
ATCAAAGAGA ACGGGGCGGC TGCTTACGGA GAAGACAGTG TTCGGCTCAA TCTGGAGGCA
GGTGCGGTCG ACACGCTCCT CCTCTCAGAA AAACTGAGAA AGGCACGGCT CACCATCAAA
TGCGGGAACT GTGACTACGA AGAAATCAAA ACCATGCAGA TCGAAGCTGG GAAAAAGTTC
AAAGATCTGC CGTTCGGCCG CTGTCCGAAG TGTCAGTCCT CACTCTTCCT TGAAAAGGAA
GCCGATATCA TCGATGAACT GACCGAGCTT GCCGATGCGT CAAACACCAG AGTAGAGATC
ATTTCAGAAG ATTTCGAGGA AGGAGCCATG CTTTACTCCG CATTCGGCGG GATTGCAGCC
GTCCTTCGAT ATCCAACGGG GATGTAA
|
|---|
| Protein sequence | MAEEHSQHEI EKDEARKRYE FKKSLERLEE KEGSGTELIS LYIPPDKQIY DVTAQLRDEY
GQCANIKSKQ TRSNVQSALS SILARLKYFK TPPENGMAIF CGAINVGGDK TDLESIIVEP
PEVIQTYSYR CSSTFELEPL KAMLDDKYVY GLLVIDRREA YWGFLRGTHI EPINGTNSTV
PGKQRKGGQS SVRFERLRLI AIHDFYSKVG ERASAAFLAE PNFFEKFKGV LIGGPMPTKE
EFASGDFLHH EVKKRIIGLF DASYTNEFGL RELVDNAQDA LRGVGIMDEK AEMSRFFKEL
IKENGAAAYG EDSVRLNLEA GAVDTLLLSE KLRKARLTIK CGNCDYEEIK TMQIEAGKKF
KDLPFGRCPK CQSSLFLEKE ADIIDELTEL ADASNTRVEI ISEDFEEGAM LYSAFGGIAA
VLRYPTGM
|
|---|
| |