Gene Mlab_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1441 
Symbol 
ID4795137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1473554 
End bp1474831 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content52% 
IMG OID640100126 
Productelongation factor 1-alpha 
Protein accessionYP_001030873 
Protein GI124486257 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5256] Translation elongation factor EF-1alpha (GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00483] translation elongation factor EF-1 alpha
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.891927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG CAAAGCCCCA CATGAATCTT GCCGTTATCG GTCACATTGA CCACGGTAAG 
TCAACAACCG TTGGCCGGAT TCTCTTCGAG ACCGGTGTCG TACAGCAGCA CATTCTTGAT
GGATACAAGA AAGAAGCAGA ATCAAAAGGA AAAGCAACTT TCGAGTTCGC CTGGGTAATG
GACTCCCTCA AGGAAGAGCG TGAACGTGGT ATTACCATCG ATATCGCTCA CAAGAAATTC
GAAACCCCGA AATACAATTT TACCGTTGTC GACTGTCCAG GTCACCGTGA CTTCGTTAAG
AACATGATCA CCGGTGCATC CCAGGCTGAT GCAGCAATCA TTGTCGTATC CGGAACCGAA
GGCCCGATGG AACAGACCAA GGAACACGTT TTCCTGTCCA AGACTCTTGG TATCAACCAG
ATCATCGTCG CCATCAACAA GATGGATGCA GTCAACTACT CCGAAGAGAA GTACAACGAA
GCAAAAGACA AGATGACCAA GCTCATCATG TCCGTTGGAT TCAAACCGGC CGAGACCCCC
TTCATCCCAA TCAGCGCATT CTGCGGTGAC AACATTAAGG AAGCATCGGC AAACACCCCC
TGGTACAAGG GCCCGACACT TCTTGCAGCA CTTGATCTCT TCAAGATGCC CGACATGCCG
ACCGACAAGC CGCTCAGACT CCCGATTCAG GATGTCTACA CCATCTCCGG TGTTGGAACC
GTCCCAGTAG GCCGTGTTGA GACCGGTATC CTCAAGAAAG GACAGAAGAT CTCCTTCATG
CCGGCAAACG TTACCGGTGA AGTTAAGTCC ATTGAGATGC ACCACGAAGA ATTCCCCGAA
GCACTTCCGG GAGACAACGT TGGTTTCAAC GTCCGTGGTA TCGCAAAGAA CGATGTTCGC
CGCGGCGATG TCTGTGGTCC GATCGAGAAC CCGCCGACCG TTGCAGAGGA ATTCACCGCA
CAGGTCGTCG TTCTCCAGCA CCCGTCCGTC CTTTCCGTAG GATACACCCC GGTGTTCCAC
TGCCACACCT CACAGACTGC ATGTATGTTC ACCGAACTTA ACAAGAAGCT GGACCCACGC
TCCGGACAGG TTAAGGAAGA GAACCCGGCA TTCCTCAAGG CCGGCGATGC AGCAATCTGT
ACCATCACTC CGACCCGCCC GCTCGTCATT GAGACTGCAA AGGAACTCCC GCAGCTCGGC
AGATTCGCTG TCCGTGATAT GGGTATGACC GTTGCAGCAG GTCTTGTTCT GAGCGTTAAA
GCAAAGCAGA TGAGATAA
 
Protein sequence
MAAAKPHMNL AVIGHIDHGK STTVGRILFE TGVVQQHILD GYKKEAESKG KATFEFAWVM 
DSLKEERERG ITIDIAHKKF ETPKYNFTVV DCPGHRDFVK NMITGASQAD AAIIVVSGTE
GPMEQTKEHV FLSKTLGINQ IIVAINKMDA VNYSEEKYNE AKDKMTKLIM SVGFKPAETP
FIPISAFCGD NIKEASANTP WYKGPTLLAA LDLFKMPDMP TDKPLRLPIQ DVYTISGVGT
VPVGRVETGI LKKGQKISFM PANVTGEVKS IEMHHEEFPE ALPGDNVGFN VRGIAKNDVR
RGDVCGPIEN PPTVAEEFTA QVVVLQHPSV LSVGYTPVFH CHTSQTACMF TELNKKLDPR
SGQVKEENPA FLKAGDAAIC TITPTRPLVI ETAKELPQLG RFAVRDMGMT VAAGLVLSVK
AKQMR