Gene Mlab_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1280 
Symbol 
ID4794860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1308190 
End bp1309566 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content51% 
IMG OID640099963 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_001030716 
Protein GI124486100 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.320775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAA AGAAGCGAAC AGCGCAGCAG AAGACTCTGG CATTTGATAA CGAAGAGTCC 
AAATCCTCGC TTCTTGCCCC GATTACGGAA AACTCAACAC TCGGCGTTTC AGACACCACG
CTCAGCGTGT CCGAACTTGC AAAACGGATC AGAGAAGTCG TCGACTGCCC GCTTCTTACG
GACATCATCG TCAGAGGAGA GATCACCGGA TATCGTCCAA ATGCGTCGGG ACATCTGTAT
TTCTCTCTTA CGGAACAGGG GGATAACCCC GCCTCAATTT CCTGCGTGAT GTGGAAATAC
TCGGTAAAAA ATCTCCCGTT TTCCGTAAAA GACGGACTGC TCGTTCAGGC AACAGGTCTT
GTCGATTTTT ACCCGGCAGG GGGAAGACTG CAGTTCATCA TAAAAAAAAT GGAGCCGGCA
GTTTCCGGAA AAGCTGGTCT TTATCTTTTG AAAGAGCAGT GGCGAAAAGA GCTTGAGGCA
AAAGGAATTA TCCCCAGACC GCAGGCGGAA ATGCGCGACC CGCCACTTTT CCCGCGAAAC
ATCGGCGTCG TTACCTCGAA GACGGGATCC GTTTTGCAGG ATATCAAAAA TGTGATCAGC
CGAAGATATC CACTTCCGAT CCTTTTAGCC GGAACATCCG TCCAGGGAGA CGGGGCTGAA
GTAGGGATCG TAGCTGCGAT CCGGTCTCTG CAGGATAAAG CCGATGTGAT TATTATTGCC
CGCGGGGGAG GAAGTTTTGA AGATCTGTTC GTCTTCAATC ATCCCGATGT CGTCACCGCG
ATCCGGAACT CGACCGTTCC GATCATCAGC GCGGTCGGCC ATGAAACCGA CACGACCCTT
TCGGATTTTG CTGCAGACCG GAGAGTTCCG ACCCCGTCTG CAGCTGCCGA GACGGTAGTT
CCGGACCGGT CCGTTCTTCT TGAAAAACTT GAAAAGGATC GGCGGTCCAT TCACGACAGA
ATGAGCTGGC TTCTCTCAGT TGAACAGAAA CACGTTGCCG ACCTGAAAAT CAGAGTCGAA
CCGAACCGTC TGACCAGAAA ACTGGAACTC ATGCATCAGC AGACGGCTGA ACTTGAAGAG
CGGATCAGAA GGGCGTGCCT TCGCAGACTG TCTGTTGAGC ACGAGGCATG CAGTGCATGG
TCGGTGATGA TTCAAAAAGG CGTGAAAAAC AAAATCACCA CCGCACGACT TGTCCTGCTT
GCTCAAAAAG AGATCATTCT CGGACGCGAC CCCTACAAAC CGCTTGAACG CGGATACGCT
CTTGTGTGGA AAGAAGGGAC ACTTGTCCGT TCCGTGAAAA ATATTGCCAA AGACGATCGG
CTGAGTCTGA AACTTGCCGA TGGAGAGATC ACCTCGATTG TGGAGAGTAT CAAATGA
 
Protein sequence
MAGKKRTAQQ KTLAFDNEES KSSLLAPITE NSTLGVSDTT LSVSELAKRI REVVDCPLLT 
DIIVRGEITG YRPNASGHLY FSLTEQGDNP ASISCVMWKY SVKNLPFSVK DGLLVQATGL
VDFYPAGGRL QFIIKKMEPA VSGKAGLYLL KEQWRKELEA KGIIPRPQAE MRDPPLFPRN
IGVVTSKTGS VLQDIKNVIS RRYPLPILLA GTSVQGDGAE VGIVAAIRSL QDKADVIIIA
RGGGSFEDLF VFNHPDVVTA IRNSTVPIIS AVGHETDTTL SDFAADRRVP TPSAAAETVV
PDRSVLLEKL EKDRRSIHDR MSWLLSVEQK HVADLKIRVE PNRLTRKLEL MHQQTAELEE
RIRRACLRRL SVEHEACSAW SVMIQKGVKN KITTARLVLL AQKEIILGRD PYKPLERGYA
LVWKEGTLVR SVKNIAKDDR LSLKLADGEI TSIVESIK