| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1220 |
|---|
| Symbol | |
|---|
| ID | 4796127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 1250037 |
|---|
| End bp | 1251095 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640099896 |
|---|
| Product | V-type ATP synthase subunit C |
|---|
| Protein accession | YP_001030656 |
|---|
| Protein GI | 124486040 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1527] Archaeal/vacuolar-type H+-ATPase subunit C |
|---|
| TIGRFAM ID | [TIGR02923] ATP synthase A1, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00015341 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.179252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGG TAATGAGCGG AACTGCTCCC TATATCTATG TTTCAACCCG CATGCGGGTC
CGCAAAGCGA AGCTCATCCC GCGGGAAGAA TATCTTCGCA TGCTGAACAT GGGTCTCACT
GAGTTTACCA GACTCATTGA GGAGATGGAG TACAAACGCG AAATCGATGA ACTTTCAGCA
TCCTTTAAAG GTGTCGACCT CATCGAAAAC GCCATGTCCT GGAACCTTGC AAAGGAGTAT
CAGCGTGTGA TCGCTCTGGC TCCTGGAGAG ATGAAAGGAT TTACCCGTGA TTACCTGCAT
AAGTGGGATA TCCAGAACAT TCTGAGTATC CTGCGAGGTA AAGAACTCGG ATTTTCCGAC
GGGAAGATCC GTGCAGTACT TGTCCCGGCC GGTGCACTCG ATGCATCGAC GCTGGACCGG
CTTGTCGCCG AGTCATCGGT TGAACGTATC GTTGAACAGC TGCCCGTAAA GCAGATGTCG
GCGATTCTCA GCGAAGGACT CAGCGAGGCA ATCGAGACCC ATTCGTTTGG GAAGATCGAG
AACGAGCTGT ATAAGTACTA TTATGCAACG CTGATCAAAG CAGCACGTGG CGGTATGAAG
GGCGGACGTC CGTTCCTGAA ATATGTCATG TTCGAAATCG ACATCAAAAA CATCACCAGT
GTTTTCAGAA TGCGTGCACA GGGCGGCGAC AACGCAGCCC AGCAGAACAT CTGGATCCCC
GGCGGTTCAT TCAAACCTGA AGAGCTCGAA AGACTCAGCA GTGTTGAAAG CACCGATGAA
GTGGTCGATT CGCTGAAAAA GAAGATCAAA GTCACCGTGC TCCTTGATGC ACTTGAATCT
CTGCGTGAGA AGAAACCGAT TTATTCGATC GAAAGCACCC TGATTGCAGC TCAGCTCAAT
CAGATGGACA AAGTATCGAA ACGCAATCCG TTCTCAATCT CGCCGCTTCT CGTGTATCTC
GAAAGAAAGA AGTATGAAGT ATCCAATCTC CGTGCCATTG CCCGTGGAAA AGAAGCAGGC
CTGGACGCGG AGACACTCGA AAAGTACCTG GTGATGTAA
|
|---|
| Protein sequence | MTEVMSGTAP YIYVSTRMRV RKAKLIPREE YLRMLNMGLT EFTRLIEEME YKREIDELSA
SFKGVDLIEN AMSWNLAKEY QRVIALAPGE MKGFTRDYLH KWDIQNILSI LRGKELGFSD
GKIRAVLVPA GALDASTLDR LVAESSVERI VEQLPVKQMS AILSEGLSEA IETHSFGKIE
NELYKYYYAT LIKAARGGMK GGRPFLKYVM FEIDIKNITS VFRMRAQGGD NAAQQNIWIP
GGSFKPEELE RLSSVESTDE VVDSLKKKIK VTVLLDALES LREKKPIYSI ESTLIAAQLN
QMDKVSKRNP FSISPLLVYL ERKKYEVSNL RAIARGKEAG LDAETLEKYL VM
|
|---|
| |