| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0772 |
|---|
| Symbol | |
|---|
| ID | 4794844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 754055 |
|---|
| End bp | 754651 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640099434 |
|---|
| Product | orotate phosphoribosyltransferase-like protein |
|---|
| Protein accession | YP_001030210 |
|---|
| Protein GI | 124485594 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0856] Orotate phosphoribosyltransferase homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00698153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000000112154 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCT TAGAAGAGCT CATGGCAAAA GCAAAAGACC TTCATGCTGA AGGCCACTCA
TCCGGTCAGA TCGCTGATGA ACTCAGCCTC TCGGTCGATA CGGTCACCTG GCTTCTGACG
CAGGGAAAGG CCGGGATCGC GGCACCGAAA GATGTACATA TCGACTGGAC GAACGTCAGT
TCGAACACCA CACTCCTTGG TGGAATCTCA TCCATGATGC TGGCCCATTT TGAGGCAGCA
AACGAAGAGG AGGAGGGAGT CGACGCCGTT ATCGGAATAT CCGTATCGGG TGTACCTCTC
GCAACGATGA TCGCCGCAGA AGACGGACTC AATCTCGCCA TATACCATCC TTCAAAACAC
AATCCGGAAG GAAAAATCGG ATCGATATCC GGAAACTTCA GCAAAGTCTC CCAAAAACGC
TGTTTAATTG TGGACGACTG CATCACAACC GGCAACACTC TTACAGAGAT CGTAAATTAT
CTGCGCCGCC ACAAAGCCAC CCCGGTTGGC ATCTGTGTAA TCTTTGATAA GCGCGGTGTC
AAGGAAATAG AGGGCGTTCC GGTCTACTCG CTGTTTACAA TTAAACGTAT CGACTGA
|
|---|
| Protein sequence | MSSLEELMAK AKDLHAEGHS SGQIADELSL SVDTVTWLLT QGKAGIAAPK DVHIDWTNVS
SNTTLLGGIS SMMLAHFEAA NEEEEGVDAV IGISVSGVPL ATMIAAEDGL NLAIYHPSKH
NPEGKIGSIS GNFSKVSQKR CLIVDDCITT GNTLTEIVNY LRRHKATPVG ICVIFDKRGV
KEIEGVPVYS LFTIKRID
|
|---|
| |