Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0587 |
Symbol | |
ID | 4795291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 558651 |
End bp | 559256 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640099245 |
Product | hypothetical protein |
Protein accession | YP_001030028 |
Protein GI | 124485412 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0839673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000680338 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCCCGC CTGAGGATCC AGAGGATCTG ACAGATCCGC CGTTTTATCT GCCGCAGTTC GAGGAGGCAT ATCAGTACAT CATTAATGAA TATTATATTG CTCCGCGGGA TATCGCGGTT TTTATCCCTT GTGCGGTACG AAAACCCTAC AGTACGAGTC CGAGCCATAA ACTGTTTCAC GCATTATTCA ACGAAGTATT TCCCGATAAG GCAAAGTATC ATGTGGTGAT TTTCGGGACA TGCGGGACGG TTCCTGCCGA ACTTGAACTG ATGTATCCGT TCGCACATTA TCATTACATG CTTGGAAACG TAAAAGATCA GAAGATCAAA GACGACTTTC TGAGAATCGA GACGGCACGT CTCGCCGGTT ATCTGGAAAA AACAAAGGAT ACCTATACAC ACAGAATAGC CTACTGTATC GGTCTGTTTC GAAAAGCGAT GGAGGCGGCC GTTCTGCAGA CCGGCATTCC CGTCGAGATC TATCCGACAA ATCCCATGAT CGACAAACTC TATGATGCCG ACTGTCCGTT TCCGGAAGGA AGCCTTTCCA TGCAGGAGTA TCTGAACGAG TTCAGAACTG CGCTCTGCGA GATGCGGGAT CGATAG
|
Protein sequence | MRPPEDPEDL TDPPFYLPQF EEAYQYIINE YYIAPRDIAV FIPCAVRKPY STSPSHKLFH ALFNEVFPDK AKYHVVIFGT CGTVPAELEL MYPFAHYHYM LGNVKDQKIK DDFLRIETAR LAGYLEKTKD TYTHRIAYCI GLFRKAMEAA VLQTGIPVEI YPTNPMIDKL YDADCPFPEG SLSMQEYLNE FRTALCEMRD R
|
| |