| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0541 |
|---|
| Symbol | |
|---|
| ID | 4795715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 515678 |
|---|
| End bp | 516358 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640099199 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029982 |
|---|
| Protein GI | 124485366 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0138156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.166106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAG CCTATATCAA AAAAGAAAAA TGCAACACGG CGATGTGTAA CCGCTGCGTG
AAGTTTTGCC CGGCGTCACG CAAAAACCAG CCGGTTATTT TCATCGGACG CAATAAGAAA
GCGACAGTCG TAGAAGAGCT GTGCAACGGC TGCGGAAAGT GCGTGAAGAT CTGCCCCGAA
AAAGCTATCG AGATGGTCAC CCGGCCGGAC AGAAAACCTC TCGACGCCGA GATCGATGAG
AAGATCGAGG AGATCGAAGC ACAGACCGAG GCAAAGACCG AAGACGTCAG CAAACAGACC
GCTCCGCCAA AGAAGAAGGA AACCCCCGAA GAGAAGGTCG TTCGCAAAAA GGCCCAGCAC
TCCGAGCGGA TCATTCGTAC GGCGATCGCC TGCGGTCTTG GTATGGTCGC GGGTCTTGTC
TCCTACTACC TTGCAGGGAC GCCGAACCCG ATCACCACAG CTACGATCGA AGCAGGCCTT
GCAGGCGTGC AGGCAAATCC GATCATCGGC ATTCTCGTCT TACTTGTGGC GATCGTGATC
CAGAAGTCCC TGTTTATGAT CATCAAGATC GACACCTCCA AACTCGGCAA GAAGGACTGG
TTCTACCAGG GGTTCCTGAC CTTCGCTACC TGGTACCTCT CCTGGACCCT TATGCTTTCG
ACCTCCCTCC TCTCCGCATA A
|
|---|
| Protein sequence | MQVAYIKKEK CNTAMCNRCV KFCPASRKNQ PVIFIGRNKK ATVVEELCNG CGKCVKICPE
KAIEMVTRPD RKPLDAEIDE KIEEIEAQTE AKTEDVSKQT APPKKKETPE EKVVRKKAQH
SERIIRTAIA CGLGMVAGLV SYYLAGTPNP ITTATIEAGL AGVQANPIIG ILVLLVAIVI
QKSLFMIIKI DTSKLGKKDW FYQGFLTFAT WYLSWTLMLS TSLLSA
|
|---|
| |