Gene Mlab_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0476 
Symbol 
ID4795167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp451955 
End bp452866 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content51% 
IMG OID640099134 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001029917 
Protein GI124485301 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGAC CAAAATCCTA TATCATACCA CATCACATAT TATTTATCAT GTTAGTTTAC 
ATAAACGGGA AATTTGTGCC TGAAGAACAG GCAACCGTGT CAATTTTCGA CCACGGATTC
CTTTACGGAG ACGGTGTGTT TGAAGGAATC AGAGCATACA ATGGTCGTGT GTTCCGCCTC
AAAGAACACG TTGACCGTCT CTTCGACTCG GCTAAAGCCT TAGATCTTGA TCCCGGGATC
ACCCGCGCCG AGATGGCCGA GATCATCAAA GAGACTCTGC GCCAGAACAA CCTGAAGGAT
GCCTACATCC GTCCGATCAT TACGCGTGGT GTCGGAACTA TGGGACTCGA CCCGCGTCAC
TGCGCAAACC CCTCGATCAT CTGTGCTGCT TCAGCCTGGG GAGCAATGTA CGGCGACCTC
TATGAAACCG GTCTTACCGC GGTGACGGTC TGTGTGAGAA GAAACCCGCC GGACACTCTC
CCGCCGAACA TCAAATCCCT CAACTACCTG AACAACATTC TTGGTAAGAT CGAGGCAAAC
TACAAGGGCG GCGACGAAGC CATCTTCCTT GATCGAACCG GAAAACTTGC AGAAGGTTCC
GGCGACAACA TCTATCTCAT AAAAGACGGC GTTCTCTACA CTCCTCCGAC CATCAACAAC
CTCAAAGGCA TCACCCGCCT TGTCCTTCTC GACATCTGCG CGAAAATCGG GATCCGCTAC
GAGATCTGCG AGCTCGGACT CTTTGATCTT TACACCGCCG ACGAAGTCAT GGTCACAGGA
ACGGCCGCAG AAATCTGCGC AATCACCAAA ATAGACGGCA GAACGATCGG AACCGGCGTT
CCAGGCCCAG TCTACAAAAA ACTTCTTGCA TCATTCCAGA CGGAGACTCA GAACTCCGGC
GATGCATACT GA
 
Protein sequence
MHRPKSYIIP HHILFIMLVY INGKFVPEEQ ATVSIFDHGF LYGDGVFEGI RAYNGRVFRL 
KEHVDRLFDS AKALDLDPGI TRAEMAEIIK ETLRQNNLKD AYIRPIITRG VGTMGLDPRH
CANPSIICAA SAWGAMYGDL YETGLTAVTV CVRRNPPDTL PPNIKSLNYL NNILGKIEAN
YKGGDEAIFL DRTGKLAEGS GDNIYLIKDG VLYTPPTINN LKGITRLVLL DICAKIGIRY
EICELGLFDL YTADEVMVTG TAAEICAITK IDGRTIGTGV PGPVYKKLLA SFQTETQNSG
DAY