Gene Mlab_0436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0436 
Symbol 
ID4794631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp421385 
End bp422245 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content60% 
IMG OID640099095 
Productsuccinate dehydrogenase 
Protein accessionYP_001029879 
Protein GI124485263 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACC GTTCCCTTCT TGACTCGATC CGTCATCTGA TCGGCGAAGA CGAGACGGCG 
GACGACTGCG CCGCCTTCGA CCTCTTGGAC GGCAGGATCC TCGTCTCCAG CACCGACATG
CTGCACGAGA CGACCGACTT CCCGAAAGGC ATGACCGAAT TCGAAAAAGG CTGGATGAGC
GCCGCCGTCA CGCTTTCGGA TATCGCGAGC TGCGGGGCAA AACCCGTCCA GCTCCTTGTT
GCCGTCGGTC TGGACGATCC ATCCCGGCTT GTTCCCTTTA TGGAAGGCGC CGTTTCCTGC
GCAAAAACCT TCGGCGCGAA GGTTTCCGGC GGGGATATCG ACAGTCATAT CGAACTCACC
GTTGTGACAA CGGGTTTTGG GATCGTGGAA AAAACGCACT ACTGCCGGCG GTCCGGTGCC
CGTGCCGGCG ATCTCGTCTG TATCACGGGA ACACCGGGGC TTGCCATGGC GGCACTCGAA
GGCGATGAAC GCTACCGGAA AAATCTGCTC ACCCCGATCC CGCAGGTAAA AGCCGGGCAG
AAAATCGCCG CCGCCGGCGC GTCCTCGATG ATGGACGTCT CAGATGGTCT TTCGATCTCT
CTTTTTGATA TGTCGGAGGC GTCCAACGTC GGATTCGCGC TCGAATCGGC AAAATTCAAT
CTCCCGGACG TCCGGGCAGG GTCCGCACGG GAGTATTATC TCTACGGCGG CGGGGACTTT
GGTCTCCTTT TCTGCATATC GCGGGAGCGT TTACCGGCCC TCGATGCGGA GTACACCGTT
ATCGGTAAGG TCGTCGGGGA AAAAGGGGTC TGGTGCGACG GGGAGCCTGT CGAAAAGCGG
GGCTATGCTC ACTCCTGGTG A
 
Protein sequence
MDDRSLLDSI RHLIGEDETA DDCAAFDLLD GRILVSSTDM LHETTDFPKG MTEFEKGWMS 
AAVTLSDIAS CGAKPVQLLV AVGLDDPSRL VPFMEGAVSC AKTFGAKVSG GDIDSHIELT
VVTTGFGIVE KTHYCRRSGA RAGDLVCITG TPGLAMAALE GDERYRKNLL TPIPQVKAGQ
KIAAAGASSM MDVSDGLSIS LFDMSEASNV GFALESAKFN LPDVRAGSAR EYYLYGGGDF
GLLFCISRER LPALDAEYTV IGKVVGEKGV WCDGEPVEKR GYAHSW