| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0384 |
|---|
| Symbol | |
|---|
| ID | 4794726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 360597 |
|---|
| End bp | 361295 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640099036 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001029827 |
|---|
| Protein GI | 124485211 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1321] Mn-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTG AACTCTCGGA AGATATTCTC GAAGCAATAC TCAATACCGG CAAAGAGACG
GTAAAGGTCT CGAATCTGGA GGATATGGCA CACGGCGACA CTGATAAGTT CAGCAAAGCG
CTTACCTGCC TCAAAGACAA AGGCTACGTC ACCGAATCGG CAAAAGGACT TTCTCTCACG
GACAAGGGCG CAGTGAAAGC GGCCCAGGTG GCGCGCAAAC ATGCGGTGCT GACCAGTTTC
CTCACCGACG TTCTCGGCAC CGAACCAGAT CATGCTTCAA AGGAAGCATG CCAGATGGAA
CACAGCATCT CCACCGAGAC GATCGACCGT CTCGACACAT TCCTGGAAAA CCGGGGTCCG
GGACACAAAC CTGGACACGG ACGAACATGG GGAAGAAGGG CAGCCCGAAC AGAGCATCCC
GTAATGCAGG AACATGAAGG ACATGCCGGC CTTACAAAAC GCAATCCGAT CGTTTCCTTA
TCCGAGTGCG AGGAAGGCTC TCTTCTGCAT GTCTCCATGA TCCGGTGTTT TGGTAAACAC
AGCAGGCTCA TCGATCTCGG CGTGATTCCC GGGGAACTGA TCACACTTCG GCGAAAACTC
GACAATCACG CTGTTGTAAT CACCGTCAAA GGATGCGACA TCGCCCTAAG TCCCGAGGTT
GCCGAGAATA TTATGGTCGA GCGGTGCAAC ACGCAATGA
|
|---|
| Protein sequence | MTFELSEDIL EAILNTGKET VKVSNLEDMA HGDTDKFSKA LTCLKDKGYV TESAKGLSLT
DKGAVKAAQV ARKHAVLTSF LTDVLGTEPD HASKEACQME HSISTETIDR LDTFLENRGP
GHKPGHGRTW GRRAARTEHP VMQEHEGHAG LTKRNPIVSL SECEEGSLLH VSMIRCFGKH
SRLIDLGVIP GELITLRRKL DNHAVVITVK GCDIALSPEV AENIMVERCN TQ
|
|---|
| |