| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0364 |
|---|
| Symbol | |
|---|
| ID | 4794893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 343072 |
|---|
| End bp | 344097 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640099014 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029807 |
|---|
| Protein GI | 124485191 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG ATACCGAAGT AAATATGATG CACGGAGCCG GCGGGGAGGT CATGGGAGAA
CTTCTCCAGA CACTCACGGC GTTCAAAAAC AATAATGCCG GCGGAATCGG CCTTGAGTCT
CTGGATGACG GATCGACATT CACAATCGGG GGAAAGACTA CCGTTTTAAC CACCGACTCG
CACGTGGTCA AGCCGATCTT TTTTCCGGGC GGGGACATCG GCAGGGTCGC GGTCTCTGGA
ACAATCAATG ATCTTGCCGT GATGGGTGCA CGGCCGATCG CCCTGACCTG TGCAATGGTC
ATTGAAGAAG GATTTCCGAT CACTGATCTT GAAAAGATCG TTGCTTCGAT GGATGAAGCC
TTAGGAGAGG TCGGAGCAGC AGTCATCACC GGCGATACGA AAGTCGTTGA GAAAGGAAGT
CTTGACGGAA TCGTGATCAA TACTGCCGGA GTTGGCGTGA TCGAGGAGGA AGGATTTCTG
ATTCGCGACA AAAATCTCTC GGTCGGAGAC AAGATCATCG TATCCGGTAC GCTCGGAGAT
CACGGACTTG CCATCGTTTC GTTTAGAGAA GGGTTCGATC TTGGGGATCA GCTGAAGTCC
GACGTTGCCC CGCTCTGGAC GATGATCGAA GCAGCGATGA AGGCGGCCGG TACTAATAAT
ATTCACGCAA TGAAGGATCC GACACGTGGA GGATTTGCAG CCTGCATCAA CGAGATGGCC
CGCAAAGCCG GCGTAAAGGT CGTCGTCAGC GAAGAAAAAG TTCCCATCAG GGAAAGCGTT
GCCTCCGCAG GATCCCTTCT TGGAATCGAC CCGCTGCAGG TCGCAAATGA GGGTAAATGC
GTGATGGGCG TTGCTCCCGA AGCAGCGGAC CGCGTGCTTG CCGCCCTGAA AAACCACCCG
TACGGGAAAA ATGCCGCAAT CATCGGCGAA GTGATTGAAG GTTCCGGGGT TGTCATGCAG
ACACGTATCG GCGGCGAACG ATTCATCGAA CCGCCGCTTG GCGATCCGGT TCCAAGAGTT
TGCTGA
|
|---|
| Protein sequence | MKKDTEVNMM HGAGGEVMGE LLQTLTAFKN NNAGGIGLES LDDGSTFTIG GKTTVLTTDS
HVVKPIFFPG GDIGRVAVSG TINDLAVMGA RPIALTCAMV IEEGFPITDL EKIVASMDEA
LGEVGAAVIT GDTKVVEKGS LDGIVINTAG VGVIEEEGFL IRDKNLSVGD KIIVSGTLGD
HGLAIVSFRE GFDLGDQLKS DVAPLWTMIE AAMKAAGTNN IHAMKDPTRG GFAACINEMA
RKAGVKVVVS EEKVPIRESV ASAGSLLGID PLQVANEGKC VMGVAPEAAD RVLAALKNHP
YGKNAAIIGE VIEGSGVVMQ TRIGGERFIE PPLGDPVPRV C
|
|---|
| |