| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0194 |
|---|
| Symbol | |
|---|
| ID | 4795766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 182175 |
|---|
| End bp | 182855 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640098840 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029637 |
|---|
| Protein GI | 124485021 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000219285 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGA TCCCTGTGGT CGAACTGCAT GACGTCTCCA AAATCTATCC GATGCCCGCC
GGAGACGTCC ATGCATTAAA CCACGTAAAT TTCTCCATTC AGAAAGGAGA ATTTGTGGCC
ATCATGGGAC CGTCAGGTTC TGGCAAATCG ACACTGATGA ATATGATCGG GTGTCTGGAT
GTCCCAACCT CCGGCGAGAT AAAAATCAAC GGAAAATCGA CGTCCGAGAT GACCGACGAC
GAGCTGACCC TCCACCGGAG AGAGACGATC GGATTCATCT TCCAGAAGTT CAACCTGATC
AGTCTTTTGA CGGCATATGA AAACGTCGAG TATCCGCTGA TCTTAAAACA CGGACATAAA
GATAATACGA CCCGAACCAG AGATCTTCTC AGAATGGTCG GCCTCACCGA CGGTCAGATG
CAGCACACGC CGTATGAACT CTCCGGTGGT CAGCAGCAGA GAGTGTCCAT TGCCCGGGCT
CTTGCAAATG ATCCGACATT CCTGTTGTGC GATGAGCCGA CAGGAAATCT GGATTCAAAG
ATGAGTATGC AGATCATGGA TATCCTGACC GATCTGCATT CCCAGGGAAG AACGGTTGTC
ATGGTCACGC ATGATCCGAA AACGGCAGAG TATGCCGAAC GTATCGTGAT CATCAAGGAT
GGTGAGATCG TCGATGAGTG A
|
|---|
| Protein sequence | MNSIPVVELH DVSKIYPMPA GDVHALNHVN FSIQKGEFVA IMGPSGSGKS TLMNMIGCLD
VPTSGEIKIN GKSTSEMTDD ELTLHRRETI GFIFQKFNLI SLLTAYENVE YPLILKHGHK
DNTTRTRDLL RMVGLTDGQM QHTPYELSGG QQQRVSIARA LANDPTFLLC DEPTGNLDSK
MSMQIMDILT DLHSQGRTVV MVTHDPKTAE YAERIVIIKD GEIVDE
|
|---|
| |