Gene Mlab_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0148 
Symbol 
ID4795991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp135071 
End bp135568 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content51% 
IMG OID640098795 
Productputative RNA-binding protein 
Protein accessionYP_001029592 
Protein GI124484976 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2016] Predicted RNA-binding protein (contains PUA domain) 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.026046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACC TTATCATTAA AAAACGCCAC GCCATCAAAA AAAGTCAGCT TGCAGCTTTG 
ATGACAAAAC TTACCGAGAA TATCGGAGAA GATGCAGCTT TGTACAATGC CCCCATGATC
GAGATCGCGG AGACAGCATC CAAATTCAAT ATCTACATCA TCGATAAAAA ACCGCTTATC
ATGGAGAAGG ACGACTGGGC GTTCCCCACG CTTCGGGGGG CAGTCTCCCG TCCGTTTTCT
GGGAGAAGGA TCGTGGTCGA TATGGGGGCG ATCCCCTATA TGATCAACGG CGCAGACGTT
ATGCGTCCCG GAATCGTATC GGTCACGGAC GACGTAAAGG CCGGTCAGCC GGCGCTCGCC
GTTGACGAAA GTCACGACAA ACCCCTCGCG GTTGTACTTC CACTGTATGA TGCGAAAGAT
ATCATCGCGC TTGAGAAGGG AAAGGCGGCG AAAAATCTGC ATTACATCGG TGACGAGCTC
TGGAATCTGG AGATCTAA
 
Protein sequence
MADLIIKKRH AIKKSQLAAL MTKLTENIGE DAALYNAPMI EIAETASKFN IYIIDKKPLI 
MEKDDWAFPT LRGAVSRPFS GRRIVVDMGA IPYMINGADV MRPGIVSVTD DVKAGQPALA
VDESHDKPLA VVLPLYDAKD IIALEKGKAA KNLHYIGDEL WNLEI