Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0109 |
Symbol | |
ID | 4796193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 100652 |
End bp | 101371 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640098756 |
Product | hypothetical protein |
Protein accession | YP_001029553 |
Protein GI | 124484937 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0207] Thymidylate synthase |
TIGRFAM ID | [TIGR03283] thymidylate synthase, methanogen type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.302253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTAC TTCGTGCACC GAACCTTGCA CGGGCACATG AACTTGTTAT CCGGTATATT CTGGAAAAGG GTAGCTTGCT GACCACCGAA AACGGCGAGG AGACGGTCGA AACCGATGAG GTCTGCCTCT TCGTCGACAC ACCGCTTGCA AAGCCGATGG TCTCCCCCTG CTCCAGATTT AAGGAAGCTT TTCTGGAAGC ATATGCCCGA AATCTGATTG ATGGTTCGGA TTCGGTGTTT GAGTATGATT ATCACGGCAG GCTTTTCGAC TGGGGCTGCG GACTTACGCA AAACGGCGAA ATCCATCAGG ACCAGATCCA GTATATCATC GATAAATTAC GGGAATGCCC GGTATCCCGC CGTGCCGTCG CCGTCACCTG GTGTCCCCCG GTTGATGCAA AACTTGCTGA CTGTCCCTGT CTTCAGCTGG TCCAGTGTGT TGTCAGAGAT GGAAAACTGA ATATGAAGAT CGTTTTCCGG AGCAATGATA TGCTTTCGGC CGCCGGATCG AATATGTTTG CCCTTGCAAA ACTCCAGGAA TATATCGCAG AAAAAATTGG GGTAGAGGTT GGGACGTACA CGCACATATC GCTTGTACCT CATGTATATT ATAAGCGGGA TGCAGCCGAC ATTCCGCCGT TTTGCGGAAA GGGAACACAG TTCACTCCGT GCATCGAGGT TTGCCGTGTA TGCGGCGGAT GCGCGAAAGC AAAACGCTAA
|
Protein sequence | MKLLRAPNLA RAHELVIRYI LEKGSLLTTE NGEETVETDE VCLFVDTPLA KPMVSPCSRF KEAFLEAYAR NLIDGSDSVF EYDYHGRLFD WGCGLTQNGE IHQDQIQYII DKLRECPVSR RAVAVTWCPP VDAKLADCPC LQLVQCVVRD GKLNMKIVFR SNDMLSAAGS NMFALAKLQE YIAEKIGVEV GTYTHISLVP HVYYKRDAAD IPPFCGKGTQ FTPCIEVCRV CGGCAKAKR
|
| |