Gene Mlab_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0109 
Symbol 
ID4796193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp100652 
End bp101371 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content51% 
IMG OID640098756 
Producthypothetical protein 
Protein accessionYP_001029553 
Protein GI124484937 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03283] thymidylate synthase, methanogen type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.302253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC TTCGTGCACC GAACCTTGCA CGGGCACATG AACTTGTTAT CCGGTATATT 
CTGGAAAAGG GTAGCTTGCT GACCACCGAA AACGGCGAGG AGACGGTCGA AACCGATGAG
GTCTGCCTCT TCGTCGACAC ACCGCTTGCA AAGCCGATGG TCTCCCCCTG CTCCAGATTT
AAGGAAGCTT TTCTGGAAGC ATATGCCCGA AATCTGATTG ATGGTTCGGA TTCGGTGTTT
GAGTATGATT ATCACGGCAG GCTTTTCGAC TGGGGCTGCG GACTTACGCA AAACGGCGAA
ATCCATCAGG ACCAGATCCA GTATATCATC GATAAATTAC GGGAATGCCC GGTATCCCGC
CGTGCCGTCG CCGTCACCTG GTGTCCCCCG GTTGATGCAA AACTTGCTGA CTGTCCCTGT
CTTCAGCTGG TCCAGTGTGT TGTCAGAGAT GGAAAACTGA ATATGAAGAT CGTTTTCCGG
AGCAATGATA TGCTTTCGGC CGCCGGATCG AATATGTTTG CCCTTGCAAA ACTCCAGGAA
TATATCGCAG AAAAAATTGG GGTAGAGGTT GGGACGTACA CGCACATATC GCTTGTACCT
CATGTATATT ATAAGCGGGA TGCAGCCGAC ATTCCGCCGT TTTGCGGAAA GGGAACACAG
TTCACTCCGT GCATCGAGGT TTGCCGTGTA TGCGGCGGAT GCGCGAAAGC AAAACGCTAA
 
Protein sequence
MKLLRAPNLA RAHELVIRYI LEKGSLLTTE NGEETVETDE VCLFVDTPLA KPMVSPCSRF 
KEAFLEAYAR NLIDGSDSVF EYDYHGRLFD WGCGLTQNGE IHQDQIQYII DKLRECPVSR
RAVAVTWCPP VDAKLADCPC LQLVQCVVRD GKLNMKIVFR SNDMLSAAGS NMFALAKLQE
YIAEKIGVEV GTYTHISLVP HVYYKRDAAD IPPFCGKGTQ FTPCIEVCRV CGGCAKAKR